C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052M_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000079752-ENSDARG00000060469 CGP 7955 16:38076697-38154007
GeneTranscriptPositionBiotype
ENSDARG00000060469 (pik3r4)
phosphoinositide-3-kinase, regulatory subunit 4 		ENSDART00000085228 (pik3r4-201) 38127260-38152428 protein_coding
ENSDART00000133310 (pik3r4-001) 38126863-38154007 protein_coding
ENSDARG00000079752 (col6a6)
collagen, type VI, alpha 6 		ENSDART00000109703 (col6a6-001) 38076697-38125338 protein_coding
ENSDART00000156780 (col6a6-201) 38076708-38117371 protein_coding
CIL_00052M_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000206384-ENSG00000196455 CGP 9606 3:130560334-130746829
GeneTranscriptPositionBiotype
ENSG00000196455 (PIK3R4)
phosphoinositide-3-kinase, regulatory subunit 4 		ENST00000356763 (PIK3R4-001) 130678935-130746829 protein_coding
ENST00000504834 (PIK3R4-003) 130718531-130733938 processed_transcript
ENST00000507330 (PIK3R4-004) 130716417-130725958 protein_coding
ENST00000508273 (PIK3R4-006) 130708322-130723815 protein_coding
ENST00000511760 (PIK3R4-007) 130679010-130681071 retained_intron
ENST00000512362 (PIK3R4-008) 130680521-130686415 retained_intron
ENST00000512430 (PIK3R4-005) 130716424-130723893 protein_coding
ENST00000512677 (PIK3R4-009) 130680604-130690657 processed_transcript
ENSG00000206384 (COL6A6)
collagen, type VI, alpha 6 		ENST00000358511 (COL6A6-001) 130560334-130678155 protein_coding
ENST00000506143 (COL6A6-002) 130581682-130677044 nonsense_mediated_decay
ENST00000511332 (COL6A6-003) 130581741-130593224 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052M_0001ENSDARG00000060469ENSDART00000085228ENSDART00000133310ENSDARG00000079752ENSDART00000109703ENSDART00000156780CIL_00052M_0002ENSG00000196455ENST00000356763ENST00000504834ENST00000507330ENST00000508273ENST00000511760ENST00000512362ENST00000512430ENST00000512677ENSG00000206384ENST00000358511ENST00000506143ENST00000511332
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052M_0001ENSDARG00000060469ENSDART00000085228ENSDART00000133310ENSDARG00000079752ENSDART00000109703CIL_00052M_0002ENSG00000196455ENST00000356763ENST00000511760ENST00000512677ENSG00000206384ENST00000358511ENST00000506143ENST00000511332
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000060469 ENSDART00000085228 N/A N/A N/A N/A N/A N/A 3.482±0.00 N/A 0.176±0.00 N/A 2.528±0.00 N/A N/A N/A
ENSDART00000133310 N/A N/A N/A 7.343±4.83 N/A N/A 5.328±1.80 5.370±2.11 0.332±0.00 N/A 4.958±0.00 N/A N/A N/A
ENSDARG00000079752 ENSDART00000109703 N/A N/A N/A 0.349±0.14 N/A N/A 2.699±1.28 N/A 0.469±0.00 N/A 0.408±0.00 N/A N/A N/A
ENSDART00000156780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000196455 ENST00000356763 4.959±0.00 2.006±0.00 N/A 3.328±0.14 3.115±0.00 1.325±0.69 1.913±0.76 3.570±0.19 1.173±0.00 2.053±0.00 2.699±0.00 2.971±1.06 2.445±0.78 5.638±0.07
ENST00000504834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.263±0.86 N/A N/A
ENST00000512362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512430 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512677 N/A N/A N/A N/A N/A N/A N/A N/A 3.233±0.00 N/A 3.312±0.00 N/A N/A N/A
ENSG00000206384 ENST00000358511 0.085±0.00 N/A 0.027±0.00 N/A 0.232±0.02 N/A 0.298±0.20 0.266±0.00 0.191±0.18 2.204±0.72 N/A 0.034±0.01 0.176±0.18 0.113±0.00
ENST00000506143 0.179±0.00 N/A N/A 0.015±0.00 0.750±0.00 N/A 0.345±0.00 0.072±0.00 0.018±0.00 5.603±0.00 0.018±0.00 0.069±0.03 0.143±0.14 0.109±0.02
ENST00000511332 N/A N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A N/A N/A

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