C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: collagen, type VI, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000506143 COL6A6-002 ENSG00000206384 9606 + 3:130581682-130677044 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000506143
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000506143 0.179±0.00 0.015±0.00 0.750±0.00 0.345±0.00 0.072±0.00 0.018±0.00 5.603±0.00 0.018±0.00 0.069±0.03 0.143±0.14 0.109±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052M CIL_00052M_0002 CGP 3:130560334-130746829

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000166431 Col6a6-201 protein_coding Mus_musculus 0 830
ENSMUST00000098441 Col6a6-001 protein_coding Mus_musculus 0 830

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