C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen, type VI, alpha 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000079752 col6a6 7955 + 16:38076697-38125338 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000109703 col6a6-001 38076697-38125338 protein_coding
  ENSDART00000156780 col6a6-201 38076708-38117371 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENSDART00000109703
Transcript ID Brain Heart Liver Muscle
ENSDART00000109703 0.349±0.14 2.699±1.28 0.469±0.00 0.408±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00052M CIL_00052M_0001 CGP 16:38076697-38154007

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004867 IEA serine-type endopeptidase inhibitor activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000172752 COL6A5 collagen, type VI, alpha 5 protein_coding Homo_sapiens
ENSG00000206384 COL6A6 collagen, type VI, alpha 6 protein_coding Homo_sapiens
ENSMUSG00000032572 Col6a4 collagen, type VI, alpha 4 protein_coding Mus_musculus
ENSMUSG00000043719 Col6a6 collagen, type VI, alpha 6 protein_coding Mus_musculus
ENSMUSG00000091345 Col6a5 collagen, type VI, alpha 5 protein_coding Mus_musculus

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