C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00052U_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000019549-ENSDARG00000078890 CGP 7955 5:41635088-41816079
GeneTranscriptPositionBiotype
ENSDARG00000019549 (cds1)
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 		ENSDART00000017451 (cds1-001) 41635088-41650032 protein_coding
ENSDARG00000078890 (wdfy3)
WD repeat and FYVE domain containing 3 		ENSDART00000114481 (wdfy3-201) 41674127-41816079 protein_coding
ENSDART00000146664 (wdfy3-001) 41780302-41803222 protein_coding
CIL_00052U_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163624-ENSG00000163625 CGP 9606 4:84582979-84966391
GeneTranscriptPositionBiotype
ENSG00000163624 (CDS1)
CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1 		ENST00000295887 (CDS1-001) 84582979-84651338 protein_coding
ENST00000511298 (CDS1-002) 84583269-84619511 nonsense_mediated_decay
ENSG00000163625 (WDFY3)
WD repeat and FYVE domain containing 3 		ENST00000295888 (WDFY3-001) 84669610-84966391 protein_coding
ENST00000425179 (WDFY3-002) 84672291-84682948 retained_intron
ENST00000426414 (WDFY3-003) 84808866-84896941 retained_intron
ENST00000502713 (WDFY3-006) 84860564-84966391 protein_coding
ENST00000504839 (WDFY3-010) 84735106-84739330 retained_intron
ENST00000504990 (WDFY3-007) 84849673-84860563 retained_intron
ENST00000505923 (WDFY3-011) 84801782-84810107 processed_transcript
ENST00000509172 (WDFY3-005) 84860412-84966350 protein_coding
ENST00000509825 (WDFY3-009) 84751248-84755399 retained_intron
ENST00000512267 (WDFY3-008) 84801790-84804174 processed_transcript
ENST00000514071 (WDFY3-004) 84841192-84850015 protein_coding
ENST00000514711 (WDFY3-013) 84691726-84733462 protein_coding
ENSG00000180769 (WDFY3-AS2)
WDFY3 antisense RNA 2 		ENST00000318186 (WDFY3-AS2-002) 84966793-85007015 antisense
ENST00000451762 (WDFY3-AS2-001) 84967005-85011277 antisense
ENST00000624443 (WDFY3-AS2-003) 84965682-85006040 lincRNA
ENSG00000239466 (RN7SL552P)
RNA, 7SL, cytoplasmic 552, pseudogene 		ENST00000462094 (RN7SL552P-201) 84687725-84688000 misc_RNA
ENSG00000252062 (RNU6-469P)
RNA, U6 small nuclear 469, pseudogene 		ENST00000516253 (RNU6-469P-201) 84886386-84886486 snRNA
CIL_00052U_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029330-ENSMUSG00000043940 CGP 10090 5:101765130-102069921
GeneTranscriptPositionBiotype
ENSMUSG00000029330 (Cds1)
CDP-diacylglycerol synthase 1 		ENSMUST00000031273 (Cds1-001) 101765130-101823858 protein_coding
ENSMUST00000132213 (Cds1-002) 101806548-101821447 retained_intron
ENSMUSG00000043940 (Wdfy3)
WD repeat and FYVE domain containing 3 		ENSMUST00000053177 (Wdfy3-001) 101832956-102069921 protein_coding
ENSMUST00000172512 (Wdfy3-007) 101935081-101937676 processed_transcript
ENSMUST00000172927 (Wdfy3-006) 101922817-101930853 nonsense_mediated_decay
ENSMUST00000173385 (Wdfy3-008) 101884051-101895050 protein_coding
ENSMUST00000173955 (Wdfy3-003) 101834937-101851513 retained_intron
ENSMUST00000174103 (Wdfy3-005) 101833323-101943954 protein_coding
ENSMUST00000174598 (Wdfy3-004) 101836158-101981558 protein_coding
ENSMUST00000174698 (Wdfy3-002) 101929306-102069921 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052U_0001ENSDARG00000019549ENSDART00000017451ENSDARG00000078890ENSDART00000114481ENSDART00000146664CIL_00052U_0002ENSG00000163624ENST00000295887ENST00000511298ENSG00000163625ENST00000295888ENST00000425179ENST00000426414ENST00000502713ENST00000504839ENST00000504990ENST00000505923ENST00000509172ENST00000509825ENST00000512267ENST00000514071ENST00000514711ENSG00000180769ENST00000318186ENST00000451762ENST00000624443ENSG00000239466ENST00000462094ENSG00000252062ENST00000516253CIL_00052U_0003ENSMUSG00000029330ENSMUST00000031273ENSMUST00000132213ENSMUSG00000043940ENSMUST00000053177ENSMUST00000172512ENSMUST00000172927ENSMUST00000173385ENSMUST00000173955ENSMUST00000174103ENSMUST00000174598ENSMUST00000174698
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00052U_0001ENSDARG00000019549ENSDART00000017451ENSDARG00000078890ENSDART00000114481CIL_00052U_0002ENSG00000163624ENST00000295887ENSG00000163625ENST00000295888ENST00000425179ENST00000426414ENST00000514711ENSG00000180769ENST00000318186ENST00000451762ENST00000624443ENSG00000239466ENST00000462094ENSG00000252062ENST00000516253CIL_00052U_0003ENSMUSG00000029330ENSMUST00000031273ENSMUST00000132213ENSMUSG00000043940ENSMUST00000053177ENSMUST00000173955ENSMUST00000174598
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019549 ENSDART00000017451 N/A N/A N/A 23.932±5.09 N/A N/A 1.181±0.56 1.724±0.82 2.041±0.00 N/A 0.471±0.00 N/A N/A N/A
ENSDARG00000078890 ENSDART00000114481 N/A N/A N/A 14.927±4.67 N/A N/A 2.222±1.19 2.134±0.44 0.107±0.00 N/A 1.622±0.00 N/A N/A N/A
ENSDART00000146664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000163624 ENST00000295887 0.080±0.00 0.094±0.00 0.864±0.00 4.124±1.53 0.482±0.18 0.559±0.35 0.093±0.02 4.012±0.00 0.269±0.06 1.844±0.89 N/A 2.402±1.18 2.387±1.24 3.214±0.03
ENST00000511298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163625 ENST00000295888 1.110±0.00 0.263±0.00 4.082±0.00 2.394±1.32 1.053±0.45 1.617±0.00 2.126±0.47 0.761±0.00 N/A N/A N/A 0.573±0.23 0.503±0.15 0.752±0.00
ENST00000425179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.323±0.00 4.188±0.00 N/A
ENST00000426414 N/A N/A N/A N/A N/A N/A N/A 2.202±0.00 N/A N/A N/A N/A N/A N/A
ENST00000502713 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514071 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514711 N/A N/A 14.726±0.00 7.738±0.00 5.706±0.00 4.645±0.00 N/A 3.771±0.00 N/A 7.994±0.00 2.860±0.00 7.933±0.00 N/A N/A
ENSG00000180769 ENST00000318186 0.386±0.00 N/A 3.294±0.00 0.351±0.00 N/A 0.363±0.00 0.832±0.00 0.605±0.00 0.292±0.22 0.993±0.00 0.683±0.54 0.739±0.13 0.190±0.02 0.926±0.15
ENST00000451762 0.213±0.00 N/A N/A N/A N/A 0.824±0.00 0.274±0.00 0.092±0.05 0.047±0.00 N/A N/A 0.245±0.24 0.179±0.03 1.508±0.00
ENST00000624443 N/A N/A N/A N/A N/A N/A N/A N/A 0.273±0.00 N/A 0.989±0.00 N/A N/A N/A
ENSG00000239466 ENST00000462094 N/A N/A N/A N/A 1.881±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252062 ENST00000516253 N/A N/A N/A N/A 908.900±0.00 N/A 70.150±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029330 ENSMUST00000031273 1.270±0.23 3.565±0.58 40.171±7.22 5.853±5.15 2.137±0.39 49.340±6.30 0.348±0.07 14.416±1.38 0.132±0.08 9.599±0.55 0.172±0.07 5.527±2.15 9.437±3.14 40.477±18.66
ENSMUST00000132213 3.813±1.69 N/A N/A N/A 3.713±0.00 N/A 0.965±0.00 N/A 0.208±0.01 N/A 0.530±0.00 N/A 18.910±0.00 50.561±0.00
ENSMUSG00000043940 ENSMUST00000053177 N/A 1.600±0.68 1.399±0.04 8.026±2.42 1.243±0.41 2.247±1.27 0.643±0.00 2.524±0.78 0.842±0.10 2.262±0.00 N/A 2.452±0.71 2.634±1.21 1.278±0.23
ENSMUST00000172512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173955 N/A N/A N/A N/A N/A 3.848±0.33 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174103 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000174598 N/A N/A 1.241±0.00 3.233±0.00 N/A N/A N/A N/A N/A N/A N/A 3.019±0.00 4.157±0.00 1.202±0.00
ENSMUST00000174698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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