C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00053K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000040251-ENSDARG00000074656 CGP 7955 16:31753228-31773725
GeneTranscriptPositionBiotype
ENSDARG00000040251 (ctsk)
cathepsin K 		ENSDART00000011497 (ctsk-001) 31753228-31762840 protein_coding
ENSDARG00000074656 (ctssb.1)
cathepsin Sb, tandem duplicate 1 		ENSDART00000112116 (ctssb.1-001) 31769424-31773725 protein_coding
ENSDART00000148450 (ctssb.1-002) 31769429-31772696 retained_intron
CIL_00053K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028111-ENSMUSG00000038642 CGP 10090 3:95499286-95556403
GeneTranscriptPositionBiotype
ENSMUSG00000028111 (Ctsk)
cathepsin K 		ENSMUST00000015664 (Ctsk-201) 95499286-95509362 protein_coding
ENSMUSG00000038642 (Ctss)
cathepsin S 		ENSMUST00000015667 (Ctss-001) 95526786-95556400 protein_coding
ENSMUST00000116304 (Ctss-201) 95526786-95556403 protein_coding
ENSMUSG00000083822 (Hmgb1-ps5)
high mobility group box 1, pseudogene 5 		ENSMUST00000121058 (Hmgb1-ps5-001) 95530418-95530974 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053K_0001ENSDARG00000040251ENSDART00000011497ENSDARG00000074656ENSDART00000112116ENSDART00000148450CIL_00053K_0002ENSMUSG00000028111ENSMUST00000015664ENSMUSG00000038642ENSMUST00000015667ENSMUST00000116304ENSMUSG00000083822ENSMUST00000121058
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053K_0001ENSDARG00000040251ENSDART00000011497ENSDARG00000074656ENSDART00000112116CIL_00053K_0002ENSMUSG00000028111ENSMUST00000015664ENSMUSG00000038642ENSMUST00000015667ENSMUST00000116304ENSMUSG00000083822ENSMUST00000121058
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000040251 ENSDART00000011497 N/A N/A N/A 4.448±1.55 N/A N/A 144.544±100.74 146.270±77.35 1.739±0.00 N/A 8.434±0.00 N/A N/A N/A
ENSDARG00000074656 ENSDART00000112116 N/A N/A N/A 4.277±4.35 N/A N/A 19.136±11.56 286.847±0.00 5.551±0.00 N/A 9.904±0.00 N/A N/A N/A
ENSDART00000148450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028111 ENSMUST00000015664 16.201±5.95 0.824±0.43 36.775±3.15 2.208±1.42 24.858±4.03 2.614±0.74 2.604±0.77 4.139±0.39 0.733±0.44 6.972±1.53 2.115±0.57 7.719±3.20 24.750±7.75 0.437±0.15
ENSMUSG00000038642 ENSMUST00000015667 3.281±1.06 N/A N/A N/A 4.599±0.00 8.169±1.28 0.774±0.00 1.081±0.19 1.200±0.26 N/A 0.582±0.08 2.369±1.68 N/A 0.336±0.21
ENSMUST00000116304 26.465±11.26 10.841±1.95 22.079±0.76 23.339±29.68 39.294±3.42 62.497±5.94 5.185±0.80 7.908±2.57 18.096±12.50 58.270±5.74 2.677±2.92 24.723±31.77 10.324±10.52 1.142±0.50
ENSMUSG00000083822 ENSMUST00000121058 N/A N/A 0.069±0.00 0.183±0.13 0.163±0.00 0.187±0.00 N/A N/A 0.227±0.29 N/A 0.107±0.00 0.183±0.01 0.195±0.15 0.060±0.03

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