C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000116304 Ctss-201 ENSMUSG00000038642 10090 + 3:95526786-95556403 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000116304
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000116304 26.465±11.26 10.841±1.95 22.079±0.76 23.339±29.68 39.294±3.42 62.497±5.94 5.185±0.80 7.908±2.57 18.096±12.50 58.270±5.74 2.677±2.92 24.723±31.77 10.324±10.52 1.142±0.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053K CIL_00053K_0002 CGP 3:95499286-95556403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005764 IDA lysosome
GO:0006508 IDA proteolysis
GO:0008233 IDA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0016020 IDA membrane
GO:0031905 TAS early endosome lumen
GO:0034769 IMP basement membrane disassembly
GO:0050729 IGI positive regulation of inflammatory response
GO:0051603 IMP proteolysis involved in cellular protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368985 CTSS-001 protein_coding Homo_sapiens 0 867
ENST00000448301 CTSS-006 protein_coding Homo_sapiens 0 593
ENST00000480760 CTSS-002 processed_transcript Homo_sapiens 0 497

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