C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cathepsin S
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000015667 Ctss-001 ENSMUSG00000038642 10090 + 3:95526786-95556400 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverMuscleOvaryTestisENSMUST00000015667
Transcript ID Adipose Breast Colon Heart Kidney Liver Muscle Ovary Testis
ENSMUST00000015667 3.281±1.06 4.599±0.00 8.169±1.28 0.774±0.00 1.081±0.19 1.200±0.26 0.582±0.08 2.369±1.68 0.336±0.21

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053K CIL_00053K_0002 CGP 3:95499286-95556403

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001968 IEA fibronectin binding
GO:0002250 IEA adaptive immune response
GO:0004197 IEA cysteine-type endopeptidase activity
GO:0005518 IEA collagen binding
GO:0005615 IEA extracellular space
GO:0005764 IDA lysosome
GO:0006508 IDA proteolysis
GO:0008233 IDA peptidase activity
GO:0016020 IDA membrane
GO:0030574 IEA collagen catabolic process
GO:0034769 IEA basement membrane disassembly
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0043236 IEA laminin binding
GO:0043394 IEA proteoglycan binding
GO:0050729 IGI positive regulation of inflammatory response
GO:0051603 IEA proteolysis involved in cellular protein catabolic process
GO:0097067 IEA cellular response to thyroid hormone stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000368985 CTSS-001 protein_coding Homo_sapiens 0 867
ENST00000448301 CTSS-006 protein_coding Homo_sapiens 0 593
ENST00000480760 CTSS-002 processed_transcript Homo_sapiens 0 497

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