C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00053Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069954-ENSDARG00000074680 CGP 7955 13:27597496-27991220
GeneTranscriptPositionBiotype
ENSDARG00000069954 (kcnq5a)
potassium voltage-gated channel, KQT-like subfamily, member 5a 		ENSDART00000102232 (kcnq5a-201) 27597496-27844705 protein_coding
ENSDART00000139904 (kcnq5a-001) 27602747-27844705 protein_coding
ENSDART00000146230 (kcnq5a-002) 27603508-27608587 protein_coding
ENSDARG00000074680 (rims1a)
regulating synaptic membrane exocytosis 1a 		ENSDART00000112553 (rims1a-201) 27856518-27990868 protein_coding
ENSDART00000131631 (rims1a-001) 27890163-27991220 protein_coding
ENSDART00000134494 (rims1a-004) 27882459-27884845 protein_coding
ENSDART00000141035 (rims1a-003) 27890236-27899102 protein_coding
ENSDART00000142568 (rims1a-002) 27858413-27877569 protein_coding
ENSDART00000146051 (rims1a-005) 27875069-27886962 processed_transcript
CIL_00053Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000028033-ENSMUSG00000041670 CGP 10090 1:21398403-22805724
GeneTranscriptPositionBiotype
ENSMUSG00000028033 (Kcnq5)
potassium voltage-gated channel, subfamily Q, member 5 		ENSMUST00000029667 (Kcnq5-002) 21398403-21961581 protein_coding
ENSMUST00000115299 (Kcnq5-003) 21466245-21961665 retained_intron
ENSMUST00000115300 (Kcnq5-001) 21398408-21961942 protein_coding
ENSMUST00000134505 (Kcnq5-004) 21577644-21855902 processed_transcript
ENSMUST00000173058 (Kcnq5-006) 21402163-21961581 protein_coding
ENSMUST00000173404 (Kcnq5-008) 21402163-21961581 protein_coding
ENSMUST00000174183 (Kcnq5-007) 21402163-21961581 nonsense_mediated_decay
ENSMUSG00000041670 (Rims1)
regulating synaptic membrane exocytosis 1 		ENSMUST00000081544 (Rims1-201) 22286251-22805724 protein_coding
ENSMUST00000097808 (Rims1-001) 22468191-22805724 protein_coding
ENSMUST00000097809 (Rims1-202) 22286251-22805724 protein_coding
ENSMUST00000097810 (Rims1-203) 22286251-22805724 protein_coding
ENSMUST00000097811 (Rims1-204) 22286251-22805724 protein_coding
ENSMUST00000115273 (Rims1-205) 22286251-22805724 protein_coding
ENSMUST00000164877 (Rims1-206) 22286915-22315805 protein_coding
ENSMUST00000185942 (Rims1-002) 22288422-22432843 protein_coding
ENSMUSG00000082935 (Gm7658)
predicted gene 7658 		ENSMUST00000119064 (Gm7658-001) 21511933-21513056 processed_pseudogene
ENSMUSG00000097109 (Gm26580)
predicted gene, 26580 		ENSMUST00000181002 (Gm26580-201) 21959842-21962530 lincRNA
ENSMUSG00000097642 (Gm26866)
predicted gene, 26866 		ENSMUST00000180414 (Gm26866-001) 22740764-22741565 processed_pseudogene
ENSMUSG00000099692 (RP24-78G8.1)
predicted gene 5696 		ENSMUST00000189850 (RP24-78G8.1-001) 22030064-22030615 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053Q_0001ENSDARG00000069954ENSDART00000102232ENSDART00000139904ENSDART00000146230ENSDARG00000074680ENSDART00000112553ENSDART00000131631ENSDART00000134494ENSDART00000141035ENSDART00000142568ENSDART00000146051CIL_00053Q_0002ENSMUSG00000028033ENSMUST00000029667ENSMUST00000115299ENSMUST00000115300ENSMUST00000134505ENSMUST00000173058ENSMUST00000173404ENSMUST00000174183ENSMUSG00000041670ENSMUST00000081544ENSMUST00000097808ENSMUST00000097809ENSMUST00000097810ENSMUST00000097811ENSMUST00000115273ENSMUST00000164877ENSMUST00000185942ENSMUSG00000082935ENSMUST00000119064ENSMUSG00000097109ENSMUST00000181002ENSMUSG00000097642ENSMUST00000180414ENSMUSG00000099692ENSMUST00000189850
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00053Q_0001ENSDARG00000069954ENSDART00000102232ENSDART00000139904ENSDARG00000074680ENSDART00000112553ENSDART00000131631ENSDART00000142568CIL_00053Q_0002ENSMUSG00000028033ENSMUST00000029667ENSMUST00000115299ENSMUST00000115300ENSMUST00000173058ENSMUST00000173404ENSMUST00000174183ENSMUSG00000041670ENSMUST00000081544ENSMUST00000097808ENSMUST00000097809ENSMUST00000115273ENSMUST00000164877ENSMUST00000185942ENSMUSG00000082935ENSMUST00000119064ENSMUSG00000097109ENSMUST00000181002ENSMUSG00000097642ENSMUST00000180414ENSMUSG00000099692ENSMUST00000189850
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069954 ENSDART00000102232 N/A N/A N/A 0.346±0.00 N/A N/A N/A 0.251±0.00 0.052±0.00 N/A 0.774±0.00 N/A N/A N/A
ENSDART00000139904 N/A N/A N/A N/A N/A N/A 0.397±0.00 0.217±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000146230 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074680 ENSDART00000112553 N/A N/A N/A 15.370±0.00 N/A N/A 0.616±0.43 0.240±0.08 0.077±0.00 N/A 0.230±0.00 N/A N/A N/A
ENSDART00000131631 N/A N/A N/A 5.829±0.00 N/A N/A 0.502±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000134494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142568 N/A N/A N/A 13.096±0.00 N/A N/A 0.912±0.16 N/A 0.075±0.00 N/A 1.055±0.00 N/A N/A N/A
ENSDART00000146051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028033 ENSMUST00000029667 N/A 0.030±0.00 0.785±0.00 1.128±0.79 0.261±0.08 0.055±0.01 0.033±0.02 0.036±0.03 0.036±0.02 N/A 0.776±0.39 0.249±0.05 0.186±0.15 0.034±0.01
ENSMUST00000115299 N/A N/A N/A N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A
ENSMUST00000115300 0.087±0.00 N/A N/A N/A 0.130±0.04 0.076±0.04 N/A 0.029±0.00 N/A N/A 0.662±0.17 0.364±0.00 N/A N/A
ENSMUST00000134505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173058 N/A N/A N/A 9.486±0.00 N/A 0.040±0.00 0.031±0.01 N/A 0.014±0.00 N/A N/A 0.477±0.00 0.187±0.11 0.072±0.00
ENSMUST00000173404 N/A N/A N/A N/A 0.237±0.05 0.174±0.08 0.029±0.00 N/A 0.065±0.02 0.290±0.01 N/A 0.602±0.26 0.053±0.00 0.050±0.00
ENSMUST00000174183 0.036±0.00 N/A N/A N/A 0.190±0.00 0.217±0.00 0.040±0.00 0.036±0.00 0.043±0.00 N/A N/A 0.550±0.22 0.151±0.00 0.024±0.00
ENSMUSG00000041670 ENSMUST00000081544 N/A N/A N/A 1.723±0.00 N/A N/A 0.011±0.00 0.011±0.00 0.009±0.00 N/A 0.006±0.00 0.088±0.05 0.007±0.00 N/A
ENSMUST00000097808 N/A 0.060±0.02 N/A 27.890±25.49 N/A 0.175±0.00 0.019±0.00 N/A 0.029±0.01 N/A 0.026±0.00 0.047±0.02 0.061±0.00 N/A
ENSMUST00000097809 N/A N/A N/A 0.914±0.00 N/A N/A N/A 0.006±0.00 N/A N/A N/A 0.066±0.00 N/A 0.042±0.01
ENSMUST00000097810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000097811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000115273 N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A
ENSMUST00000164877 0.016±0.00 N/A 8.008±0.24 7.683±5.03 N/A 0.839±0.00 0.020±0.01 0.060±0.05 0.019±0.01 0.050±0.03 0.009±0.01 0.290±0.16 0.013±0.00 0.132±0.00
ENSMUST00000185942 0.014±0.00 N/A N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.007±0.00 N/A N/A 0.041±0.02 0.379±0.00
ENSMUSG00000082935 ENSMUST00000119064 0.099±0.03 0.626±0.26 0.129±0.01 0.363±0.43 0.166±0.07 0.424±0.25 0.380±0.23 0.810±0.46 0.440±0.37 0.227±0.11 0.031±0.01 0.229±0.17 1.850±3.15 0.302±0.21
ENSMUSG00000097109 ENSMUST00000181002 0.063±0.00 0.029±0.01 N/A N/A 0.239±0.02 0.103±0.05 0.022±0.00 0.023±0.01 0.039±0.01 0.754±0.08 N/A 0.303±0.04 N/A 0.037±0.01
ENSMUSG00000097642 ENSMUST00000180414 N/A N/A N/A 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A
ENSMUSG00000099692 ENSMUST00000189850 N/A N/A N/A 0.073±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.563±0.27

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