C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulating synaptic membrane exocytosis 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000041670 Rims1 10090 - 1:22286251-22805724 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000081544 Rims1-201 22286251-22805724 protein_coding
  ENSMUST00000097808 Rims1-001 22468191-22805724 protein_coding
  ENSMUST00000097809 Rims1-202 22286251-22805724 protein_coding
  ENSMUST00000097810 Rims1-203 22286251-22805724 protein_coding
  ENSMUST00000097811 Rims1-204 22286251-22805724 protein_coding
  ENSMUST00000115273 Rims1-205 22286251-22805724 protein_coding
  ENSMUST00000164877 Rims1-206 22286915-22315805 protein_coding
  ENSMUST00000185942 Rims1-002 22288422-22432843 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081544ENSMUST00000097808ENSMUST00000097809ENSMUST00000115273ENSMUST00000164877ENSMUST00000185942
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081544 N/A N/A N/A 1.723±0.00 N/A 0.011±0.00 0.011±0.00 0.009±0.00 N/A 0.006±0.00 0.088±0.05 0.007±0.00 N/A
ENSMUST00000097808 N/A 0.060±0.02 N/A 27.890±25.49 0.175±0.00 0.019±0.00 N/A 0.029±0.01 N/A 0.026±0.00 0.047±0.02 0.061±0.00 N/A
ENSMUST00000097809 N/A N/A N/A 0.914±0.00 N/A N/A 0.006±0.00 N/A N/A N/A 0.066±0.00 N/A 0.042±0.01
ENSMUST00000115273 N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A 0.016±0.00 N/A N/A N/A N/A
ENSMUST00000164877 0.016±0.00 N/A 8.008±0.24 7.683±5.03 0.839±0.00 0.020±0.01 0.060±0.05 0.019±0.01 0.050±0.03 0.009±0.01 0.290±0.16 0.013±0.00 0.132±0.00
ENSMUST00000185942 0.014±0.00 N/A N/A N/A N/A 0.028±0.00 N/A N/A 0.007±0.00 N/A N/A 0.041±0.02 0.379±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053Q CIL_00053Q_0002 CGP 1:21398403-22805724

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006461 IEA protein complex assembly
GO:0006886 IEA intracellular protein transport
GO:0017137 IEA Rab GTPase binding
GO:0042391 IDA regulation of membrane potential
GO:0044325 IDA ion channel binding
GO:0044822 IEA poly(A) RNA binding
GO:0045202 IDA synapse
GO:0046872 IEA metal ion binding
GO:0048169 IMP regulation of long-term neuronal synaptic plasticity
GO:0048791 IGI calcium ion-dependent exocytosis of neurotransmitter

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074680 rims1a regulating synaptic membrane exocytosis 1a protein_coding Danio_rerio
ENSG00000079841 RIMS1 regulating synaptic membrane exocytosis 1 protein_coding Homo_sapiens

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