C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulating synaptic membrane exocytosis 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097808 Rims1-001 ENSMUSG00000041670 10090 - 1:22468191-22805724 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartLiverMuscleOvaryPlacentaENSMUST00000097808
Transcript ID Adrenal Brain Colon Heart Liver Muscle Ovary Placenta
ENSMUST00000097808 0.060±0.02 27.890±25.49 0.175±0.00 0.019±0.00 0.029±0.01 0.026±0.00 0.047±0.02 0.061±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00053Q CIL_00053Q_0002 CGP 1:21398403-22805724

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264839 RIMS1-003 protein_coding Homo_sapiens 0 2278
ENST00000370419 RIMS1-001 retained_intron Homo_sapiens 0 2278
ENST00000370420 RIMS1-004 protein_coding Homo_sapiens 0.000000000009 77
ENST00000401910 RIMS1-013 protein_coding Homo_sapiens 0 1018
ENST00000425662 RIMS1-015 protein_coding Homo_sapiens 0 1018
ENST00000453976 RIMS1-016 protein_coding Homo_sapiens 0 1018
ENST00000491071 RIMS1-010 protein_coding Homo_sapiens 0 2278
ENST00000517433 RIMS1-012 protein_coding Homo_sapiens 0 1358
ENST00000517827 RIMS1-018 protein_coding Homo_sapiens 0 1018
ENST00000517960 RIMS1-005 protein_coding Homo_sapiens 0 2278
ENST00000518273 RIMS1-006 protein_coding Homo_sapiens 0 2278
ENST00000520567 RIMS1-007 protein_coding Homo_sapiens 0 2278
ENST00000521978 RIMS1-011 protein_coding Homo_sapiens 0 2278
ENST00000522291 RIMS1-008 protein_coding Homo_sapiens 0 2278
ENST00000523963 RIMS1-014 protein_coding Homo_sapiens 0 1018
ENST00000524197 RIMS1-017 retained_intron Homo_sapiens 0 1018

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