C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000553_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175938-ENSG00000099381 CGP 9606 16:30949066-30985116
GeneTranscriptPositionBiotype
ENSG00000099381 (SETD1A)
SET domain containing 1A 		ENST00000262519 (SETD1A-001) 30957294-30985116 protein_coding
ENST00000452917 (SETD1A-002) 30957756-30964195 protein_coding
ENSG00000175938 (ORAI3)
ORAI calcium release-activated calcium modulator 3 		ENST00000318663 (ORAI3-001) 30949066-30954938 protein_coding
ENST00000562699 (ORAI3-005) 30949152-30956461 protein_coding
ENST00000563161 (ORAI3-003) 30949081-30953548 nonsense_mediated_decay
ENST00000566237 (ORAI3-002) 30949123-30954506 protein_coding
ENSG00000261487 (AC135048.13)
 ENST00000562642 (AC135048.13-001) 30948531-30956511 processed_transcript
ENST00000566056 (AC135048.13-002) 30948386-30954319 processed_transcript
ENSG00000275263 (RP11-1072A3.4)
 ENST00000614997 (RP11-1072A3.4-001) 30956872-30957199 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_000553_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043964-ENSMUSG00000042308 CGP 10090 7:127769815-127800122
GeneTranscriptPositionBiotype
ENSMUSG00000042289 (Hsd3b7)
hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 		ENSMUST00000046863 (Hsd3b7-001) 127800604-127803802 protein_coding
ENSMUST00000106271 (Hsd3b7-012) 127800916-127803802 protein_coding
ENSMUST00000106272 (Hsd3b7-005) 127800614-127803802 protein_coding
ENSMUST00000124631 (Hsd3b7-009) 127800658-127802113 retained_intron
ENSMUST00000125188 (Hsd3b7-007) 127800636-127802022 processed_transcript
ENSMUST00000132702 (Hsd3b7-002) 127800604-127803802 retained_intron
ENSMUST00000136597 (Hsd3b7-010) 127800671-127802327 retained_intron
ENSMUST00000136823 (Hsd3b7-006) 127799391-127802022 processed_transcript
ENSMUST00000138432 (Hsd3b7-013) 127800941-127801518 protein_coding
ENSMUST00000139068 (Hsd3b7-011) 127800680-127802038 protein_coding
ENSMUST00000144748 (Hsd3b7-004) 127800604-127803802 retained_intron
ENSMUST00000154987 (Hsd3b7-003) 127785608-127803802 processed_transcript
ENSMUST00000155005 (Hsd3b7-008) 127800646-127802270 processed_transcript
ENSMUSG00000042308 (Setd1a)
SET domain containing 1A 		ENSMUST00000047075 (Setd1a-001) 127776670-127800122 protein_coding
ENSMUST00000047157 (Setd1a-201) 127777389-127800115 protein_coding
ENSMUST00000126761 (Setd1a-004) 127777389-127783701 protein_coding
ENSMUST00000141439 (Setd1a-005) 127778577-127781903 processed_transcript
ENSMUST00000143951 (Setd1a-003) 127777695-127778565 protein_coding
ENSMUST00000144406 (Setd1a-002) 127777149-127784074 protein_coding
ENSMUSG00000043964 (Orai3)
ORAI calcium release-activated calcium modulator 3 		ENSMUST00000061587 (Orai3-001) 127769815-127775150 protein_coding
ENSMUST00000118865 (Orai3-003) 127769815-127774692 protein_coding
ENSMUST00000121504 (Orai3-002) 127769815-127775150 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000553_0001ENSG00000099381ENST00000262519ENST00000452917ENSG00000175938ENST00000318663ENST00000562699ENST00000563161ENST00000566237ENSG00000261487ENST00000562642ENST00000566056ENSG00000275263ENST00000614997CIL_000553_0002ENSMUSG00000042289ENSMUST00000046863ENSMUST00000106271ENSMUST00000106272ENSMUST00000124631ENSMUST00000125188ENSMUST00000132702ENSMUST00000136597ENSMUST00000136823ENSMUST00000138432ENSMUST00000139068ENSMUST00000144748ENSMUST00000154987ENSMUST00000155005ENSMUSG00000042308ENSMUST00000047075ENSMUST00000047157ENSMUST00000126761ENSMUST00000141439ENSMUST00000143951ENSMUST00000144406ENSMUSG00000043964ENSMUST00000061587ENSMUST00000118865ENSMUST00000121504
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000553_0001ENSG00000099381ENST00000262519ENST00000452917ENSG00000175938ENST00000318663ENST00000563161ENSG00000261487ENST00000562642ENST00000566056ENSG00000275263ENST00000614997CIL_000553_0002ENSMUSG00000042289ENSMUST00000046863ENSMUST00000132702ENSMUST00000144748ENSMUST00000154987ENSMUSG00000042308ENSMUST00000047075ENSMUST00000047157ENSMUSG00000043964ENSMUST00000061587ENSMUST00000118865ENSMUST00000121504
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000099381 ENST00000262519 5.409±0.00 11.621±0.00 0.903±0.00 0.353±0.00 2.900±1.66 2.270±1.33 1.248±1.04 2.912±1.84 1.672±1.06 2.886±0.00 4.140±3.21 5.519±3.91 5.436±1.03 22.699±1.55
ENST00000452917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.371±0.00 N/A N/A N/A
ENSG00000175938 ENST00000318663 8.760±0.00 7.514±0.00 0.973±0.00 1.325±0.00 5.660±3.04 5.094±4.66 1.350±0.96 9.385±0.40 8.406±5.46 5.127±4.28 1.993±1.84 10.740±4.63 16.269±1.28 9.036±4.11
ENST00000562699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563161 N/A N/A N/A N/A N/A 0.577±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566237 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000261487 ENST00000562642 N/A N/A N/A N/A N/A N/A 0.307±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000566056 N/A N/A 1.071±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.508±0.00 N/A N/A
ENSG00000275263 ENST00000614997 0.069±0.00 0.281±0.00 N/A N/A 0.382±0.00 0.136±0.00 0.355±0.00 0.075±0.00 0.457±0.00 0.068±0.00 0.325±0.00 0.996±0.42 0.694±0.45 0.542±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042289 ENSMUST00000046863 35.494±7.91 33.697±3.32 19.435±2.53 2.739±0.00 37.146±8.54 21.141±4.10 9.686±2.72 14.539±1.12 247.298±193.31 24.586±1.68 3.696±1.21 27.422±6.47 18.739±2.17 N/A
ENSMUST00000106271 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106272 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000124631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132702 N/A 20.314±1.58 N/A N/A 12.519±1.48 12.044±3.02 3.060±0.00 6.073±0.16 78.755±54.11 10.262±0.45 N/A 6.067±0.00 N/A N/A
ENSMUST00000136597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138432 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144748 10.210±1.56 N/A 9.610±1.47 2.701±0.00 N/A 5.497±0.36 2.889±0.46 N/A 16.815±11.44 8.573±0.49 N/A 6.383±1.05 5.840±0.83 N/A
ENSMUST00000154987 N/A N/A N/A 2.021±0.00 N/A N/A N/A N/A N/A N/A N/A 4.564±0.00 3.333±1.30 N/A
ENSMUST00000155005 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000042308 ENSMUST00000047075 2.082±0.03 2.689±0.41 N/A 1.451±0.44 3.179±0.72 1.593±0.19 N/A 1.404±0.10 N/A N/A 1.418±0.23 2.578±0.44 3.479±0.00 1.632±0.71
ENSMUST00000047157 3.657±0.21 3.192±0.77 3.361±1.41 4.839±2.00 3.623±0.34 3.612±0.78 2.858±0.87 3.209±0.44 5.485±0.65 4.864±0.81 4.174±0.70 5.944±5.43 9.486±8.00 5.088±0.80
ENSMUST00000126761 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143951 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144406 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000043964 ENSMUST00000061587 18.636±2.42 20.449±1.66 17.508±0.20 3.059±0.18 19.447±2.31 12.429±0.90 9.802±1.13 12.070±1.05 8.269±1.98 18.511±0.50 5.406±0.88 18.113±4.96 6.954±3.49 0.551±0.00
ENSMUST00000118865 N/A 18.561±4.40 N/A N/A 8.634±1.64 6.290±1.89 N/A N/A 3.175±0.00 N/A N/A 7.421±2.52 N/A N/A
ENSMUST00000121504 N/A N/A N/A N/A N/A N/A N/A N/A 0.476±0.00 N/A 0.473±0.00 N/A 0.958±0.17 N/A

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