C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SET domain containing 1A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000047157 Setd1a-201 ENSMUSG00000042308 10090 + 7:127777389-127800115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000047157
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000047157 3.657±0.21 3.192±0.77 3.361±1.41 4.839±2.00 3.623±0.34 3.612±0.78 2.858±0.87 3.209±0.44 5.485±0.65 4.864±0.81 4.174±0.70 5.944±5.43 9.486±8.00 5.088±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000553 CIL_000553_0002 CGP 7:127769815-127800122
CIL_00044U CIL_00044U_0003 CGP 7:127776670-127803802

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0005634 ISO nucleus
GO:0019827 IMP stem cell maintenance
GO:0035097 ISO histone methyltransferase complex
GO:0051568 IMP histone H3-K4 methylation
GO:2000179 IMP positive regulation of neural precursor cell proliferation
GO:2000648 IMP positive regulation of stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000086165 setd1ba-001 protein_coding Danio_rerio 0 303
ENST00000262519 SETD1A-001 protein_coding Homo_sapiens 0 4233
ENST00000452917 SETD1A-002 protein_coding Homo_sapiens 0 992

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