C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069332-ENSDARG00000037116 CGP 7955 13:30927963-31043317
GeneTranscriptPositionBiotype
ENSDARG00000037116 (cxcl12a)
chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) 		ENSDART00000053946 (cxcl12a-001) 31027969-31043317 protein_coding
ENSDARG00000069332 (tmem72)
transmembrane protein 72 		ENSDART00000112372 (tmem72-001) 30927963-30936838 protein_coding
ENSDART00000142221 (tmem72-002) 30930924-30936838 protein_coding
CIL_00055S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048108-ENSMUSG00000061353 CGP 10090 6:116692630-117181367
GeneTranscriptPositionBiotype
ENSMUSG00000048108 (Tmem72)
transmembrane protein 72 		ENSMUST00000056623 (Tmem72-001) 116692630-116716913 protein_coding
ENSMUST00000129255 (Tmem72-002) 116695274-116716729 nonsense_mediated_decay
ENSMUSG00000061353 (Cxcl12)
chemokine (C-X-C motif) ligand 12 		ENSMUST00000073043 (Cxcl12-003) 117168577-117181367 protein_coding
ENSMUST00000112866 (Cxcl12-001) 117168535-117175069 protein_coding
ENSMUST00000112871 (Cxcl12-002) 117168574-117181366 protein_coding
ENSMUST00000134244 (Cxcl12-004) 117168577-117176127 retained_intron
ENSMUST00000185648 (Cxcl12-201) 117168535-117175069 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055S_0001ENSDARG00000037116ENSDART00000053946ENSDARG00000069332ENSDART00000112372ENSDART00000142221CIL_00055S_0002ENSMUSG00000048108ENSMUST00000056623ENSMUST00000129255ENSMUSG00000061353ENSMUST00000073043ENSMUST00000112866ENSMUST00000112871ENSMUST00000134244ENSMUST00000185648
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055S_0001ENSDARG00000037116ENSDART00000053946ENSDARG00000069332ENSDART00000112372ENSDART00000142221CIL_00055S_0002ENSMUSG00000048108ENSMUST00000056623ENSMUST00000129255ENSMUSG00000061353ENSMUST00000073043ENSMUST00000112871ENSMUST00000134244ENSMUST00000185648
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037116 ENSDART00000053946 N/A N/A N/A 16.666±4.06 N/A N/A 17.859±5.30 320.603±132.52 1.126±0.00 N/A 75.508±0.00 N/A N/A N/A
ENSDARG00000069332 ENSDART00000112372 N/A N/A N/A 0.345±0.20 N/A N/A N/A 2.673±0.00 N/A N/A 0.413±0.00 N/A N/A N/A
ENSDART00000142221 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A 0.106±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000048108 ENSMUST00000056623 0.039±0.02 N/A 0.004±0.00 0.197±0.16 N/A N/A N/A 5.937±0.60 0.004±0.00 0.049±0.03 0.017±0.01 0.506±0.27 0.029±0.02 0.019±0.00
ENSMUST00000129255 N/A N/A N/A N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.397±0.12 0.122±0.05 0.040±0.00
ENSMUSG00000061353 ENSMUST00000073043 34.469±1.78 6.885±1.60 9.691±0.68 3.024±0.03 26.383±5.17 8.811±0.96 30.551±3.71 9.170±0.97 12.013±7.01 71.803±6.61 8.922±2.12 17.828±10.03 1.414±1.41 1.293±0.67
ENSMUST00000112866 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112871 N/A N/A N/A 4.754±2.91 11.602±0.00 N/A N/A 43.879±4.07 43.232±27.03 N/A N/A 13.435±8.52 3.956±2.79 1.245±0.32
ENSMUST00000134244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.249±0.00 N/A 0.147±0.00
ENSMUST00000185648 129.193±64.77 128.302±7.98 115.803±1.88 11.738±7.40 180.470±93.78 134.305±13.75 21.975±1.49 135.149±29.63 93.598±67.98 67.352±17.34 9.221±2.09 145.319±105.91 7.380±4.99 4.556±2.82

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