C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00055T_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000056966-ENSDARG00000056979 CGP 7955 22:24831550-24979988
GeneTranscriptPositionBiotype
ENSDARG00000056966 (nek7)
NIMA (never in mitosis gene a)-related kinase 7 		ENSDART00000079536 (nek7-001) 24831550-24955160 protein_coding
ENSDARG00000056979 (lhx9)
LIM homeobox 9 		ENSDART00000054807 (lhx9-001) 24972414-24979972 protein_coding
ENSDART00000079556 (lhx9-201) 24970015-24979988 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_00055T_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026393-ENSMUSG00000019230 CGP 10090 1:138483837-138848576
GeneTranscriptPositionBiotype
ENSMUSG00000019230 (Lhx9)
LIM homeobox protein 9 		ENSMUST00000019374 (Lhx9-002) 138825186-138842457 protein_coding
ENSMUST00000046870 (Lhx9-001) 138830087-138847719 protein_coding
ENSMUST00000093486 (Lhx9-201) 138825186-138847579 protein_coding
ENSMUST00000112026 (Lhx9-005) 138830944-138842429 protein_coding
ENSMUST00000112030 (Lhx9-004) 138827997-138848576 protein_coding
ENSMUSG00000026393 (Nek7)
NIMA (never in mitosis gene a)-related expressed kinase 7 		ENSMUST00000027642 (Nek7-001) 138483837-138619749 protein_coding
ENSMUST00000186017 (Nek7-002) 138485707-138619674 protein_coding
ENSMUST00000187407 (Nek7-004) 138484112-138620218 protein_coding
ENSMUST00000188820 (Nek7-005) 138544191-138619714 processed_transcript
ENSMUST00000191549 (Nek7-003) 138513748-138619704 retained_intron

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055T_0001ENSDARG00000056966ENSDART00000079536ENSDARG00000056979ENSDART00000054807ENSDART00000079556CIL_00055T_0002ENSMUSG00000019230ENSMUST00000019374ENSMUST00000046870ENSMUST00000093486ENSMUST00000112026ENSMUST00000112030ENSMUSG00000026393ENSMUST00000027642ENSMUST00000186017ENSMUST00000187407ENSMUST00000188820ENSMUST00000191549
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00055T_0001ENSDARG00000056966ENSDART00000079536ENSDARG00000056979ENSDART00000054807ENSDART00000079556CIL_00055T_0002ENSMUSG00000019230ENSMUST00000019374ENSMUST00000046870ENSMUST00000093486ENSMUST00000112026ENSMUST00000112030ENSMUSG00000026393ENSMUST00000027642ENSMUST00000186017ENSMUST00000187407ENSMUST00000188820ENSMUST00000191549
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000056966 ENSDART00000079536 N/A N/A N/A 5.717±0.94 N/A N/A 10.711±5.41 6.060±2.04 3.311±0.00 N/A 10.277±0.00 N/A N/A N/A
ENSDARG00000056979 ENSDART00000054807 N/A N/A N/A 14.022±2.02 N/A N/A 0.480±0.00 N/A 0.268±0.00 N/A 0.518±0.00 N/A N/A N/A
ENSDART00000079556 N/A N/A N/A 9.700±0.00 N/A N/A 0.132±0.00 0.151±0.00 N/A N/A 0.642±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019230 ENSMUST00000019374 N/A N/A N/A 3.406±2.40 N/A N/A N/A N/A 0.007±0.00 N/A N/A 0.584±0.20 N/A N/A
ENSMUST00000046870 N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A 0.020±0.00 0.018±0.00 N/A 0.782±0.09 N/A 0.055±0.02
ENSMUST00000093486 N/A N/A N/A 2.126±1.21 N/A N/A 0.007±0.00 N/A 0.015±0.01 N/A 0.006±0.00 0.477±0.16 N/A 0.051±0.01
ENSMUST00000112026 N/A N/A N/A N/A 0.048±0.00 N/A N/A N/A 0.036±0.03 N/A N/A 2.183±0.72 0.004±0.00 0.147±0.06
ENSMUST00000112030 0.051±0.00 0.076±0.03 0.011±0.01 8.277±5.41 N/A 0.040±0.00 0.019±0.00 N/A 0.065±0.07 N/A N/A 1.833±0.83 0.013±0.01 0.346±0.35
ENSMUSG00000026393 ENSMUST00000027642 15.304±2.08 21.921±2.52 12.422±1.21 2.993±0.75 25.432±7.60 14.968±1.94 15.126±1.08 17.177±4.26 8.535±1.48 26.656±3.07 29.340±0.45 16.840±6.68 6.123±3.00 1.336±0.46
ENSMUST00000186017 N/A N/A N/A 1.608±0.00 N/A 5.639±0.13 N/A N/A 4.780±1.15 N/A N/A N/A 2.248±0.18 N/A
ENSMUST00000187407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.245±0.54 2.130±1.07 N/A
ENSMUST00000188820 N/A 15.488±2.66 N/A N/A 26.655±1.24 22.562±5.14 N/A 31.706±0.00 14.763±0.00 30.105±5.52 N/A 21.945±4.85 N/A 2.299±0.00
ENSMUST00000191549 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.477±4.49 N/A N/A

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