C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000058219-ENSDARG00000058230 CGP 7955 15:16416336-16443605
GeneTranscriptPositionBiotype
ENSDARG00000058219 (tubd1)
tubulin, delta 1 		ENSDART00000146735 (tubd1-001) 16416336-16425071 protein_coding
ENSDARG00000058230 (rps6kb1b)
ribosomal protein S6 kinase b, polypeptide 1b 		ENSDART00000081059 (rps6kb1b-001) 16425935-16443605 protein_coding
ENSDART00000145216 (rps6kb1b-002) 16425985-16435622 processed_transcript
ENSDART00000147078 (rps6kb1b-003) 16439128-16442634 retained_intron
CIL_00056A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000108423-ENSG00000108443 CGP 9606 17:59859482-59950564
GeneTranscriptPositionBiotype
ENSG00000108423 (TUBD1)
tubulin, delta 1 		ENST00000325752 (TUBD1-201) 59859482-59892945 protein_coding
ENST00000340993 (TUBD1-002) 59860013-59892920 protein_coding
ENST00000346141 (TUBD1-005) 59859490-59892715 protein_coding
ENST00000376094 (TUBD1-003) 59860225-59891003 protein_coding
ENST00000394239 (TUBD1-001) 59860034-59892858 protein_coding
ENST00000539018 (TUBD1-006) 59860317-59892893 protein_coding
ENST00000587476 (TUBD1-011) 59874539-59878762 retained_intron
ENST00000588009 (TUBD1-010) 59863664-59881148 retained_intron
ENST00000588706 (TUBD1-013) 59886505-59892943 processed_transcript
ENST00000590498 (TUBD1-008) 59880938-59892935 protein_coding
ENST00000591548 (TUBD1-012) 59860322-59892941 nonsense_mediated_decay
ENST00000591611 (TUBD1-014) 59878301-59892899 processed_transcript
ENST00000592145 (TUBD1-007) 59890884-59892935 protein_coding
ENST00000592426 (TUBD1-004) 59860225-59891003 protein_coding
ENST00000593110 (TUBD1-009) 59863783-59892893 nonsense_mediated_decay
ENST00000613721 (TUBD1-202) 59859482-59892945 protein_coding
ENSG00000108443 (RPS6KB1)
ribosomal protein S6 kinase, 70kDa, polypeptide 1 		ENST00000225577 (RPS6KB1-001) 59893164-59950564 protein_coding
ENST00000393021 (RPS6KB1-201) 59893046-59950421 protein_coding
ENST00000406116 (RPS6KB1-002) 59893145-59948188 protein_coding
ENST00000443572 (RPS6KB1-008) 59893130-59947137 protein_coding
ENST00000472940 (RPS6KB1-003) 59893086-59947461 nonsense_mediated_decay
ENST00000475155 (RPS6KB1-006) 59945191-59946941 retained_intron
ENST00000477179 (RPS6KB1-005) 59893126-59913805 processed_transcript
ENST00000489824 (RPS6KB1-004) 59893138-59931692 nonsense_mediated_decay
ENST00000587061 (RPS6KB1-011) 59947578-59950420 processed_transcript
ENST00000587622 (RPS6KB1-009) 59931320-59934522 retained_intron
ENST00000590928 (RPS6KB1-010) 59934145-59935037 retained_intron
ENST00000592726 (RPS6KB1-007) 59906988-59914668 protein_coding
ENSG00000241913 (RP5-1073F15.1)
 ENST00000496272 (RP5-1073F15.1-001) 59912197-59912366 processed_pseudogene
ENSG00000270264 (NDUFB8P2)
NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 8, pseudogene 2 		ENST00000605113 (NDUFB8P2-001) 59885015-59885552 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056A_0001ENSDARG00000058219ENSDART00000146735ENSDARG00000058230ENSDART00000081059ENSDART00000145216ENSDART00000147078CIL_00056A_0002ENSG00000108423ENST00000325752ENST00000340993ENST00000346141ENST00000376094ENST00000394239ENST00000539018ENST00000587476ENST00000588009ENST00000588706ENST00000590498ENST00000591548ENST00000591611ENST00000592145ENST00000592426ENST00000593110ENST00000613721ENSG00000108443ENST00000225577ENST00000393021ENST00000406116ENST00000443572ENST00000472940ENST00000475155ENST00000477179ENST00000489824ENST00000587061ENST00000587622ENST00000590928ENST00000592726ENSG00000241913ENST00000496272ENSG00000270264ENST00000605113
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056A_0001ENSDARG00000058219ENSDART00000146735ENSDARG00000058230ENSDART00000081059CIL_00056A_0002ENSG00000108423ENST00000325752ENST00000340993ENST00000346141ENST00000376094ENST00000394239ENST00000539018ENST00000587476ENST00000588706ENST00000590498ENST00000591611ENST00000592426ENST00000613721ENSG00000108443ENST00000225577ENST00000393021ENST00000406116ENST00000443572ENST00000475155ENSG00000241913ENST00000496272ENSG00000270264ENST00000605113
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058219 ENSDART00000146735 N/A N/A N/A 0.551±0.15 N/A N/A 0.515±0.25 0.440±0.58 0.251±0.00 N/A 0.766±0.00 N/A N/A N/A
ENSDARG00000058230 ENSDART00000081059 N/A N/A N/A 5.039±2.76 N/A N/A 7.561±0.34 7.544±7.26 7.401±0.00 N/A 8.862±0.00 N/A N/A N/A
ENSDART00000145216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147078 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108423 ENST00000325752 N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A N/A 2.219±0.94 N/A 1.809±0.00
ENST00000340993 N/A N/A N/A N/A 0.279±0.00 N/A 0.149±0.00 N/A 0.383±0.00 N/A N/A 1.261±0.88 0.842±0.00 1.681±0.00
ENST00000346141 N/A 0.363±0.00 N/A 0.429±0.04 0.674±0.00 0.290±0.00 0.778±0.00 0.638±0.11 N/A 0.722±0.41 0.857±0.00 1.162±0.08 0.580±0.07 N/A
ENST00000376094 0.691±0.00 0.505±0.00 0.580±0.00 N/A N/A N/A N/A N/A 0.798±0.00 1.092±0.00 1.391±0.00 0.849±0.00 N/A N/A
ENST00000394239 N/A N/A N/A N/A 0.699±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539018 N/A N/A N/A 0.724±0.00 1.099±0.00 N/A 0.531±0.13 N/A N/A N/A 0.606±0.00 1.560±0.00 N/A N/A
ENST00000587476 N/A 1.201±0.00 N/A N/A N/A 0.355±0.00 0.148±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000588009 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588706 N/A N/A N/A N/A N/A 0.925±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590498 N/A N/A N/A N/A N/A 0.857±0.00 N/A N/A N/A N/A N/A N/A N/A 3.005±0.00
ENST00000591548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591611 N/A N/A N/A 0.649±0.00 N/A 0.998±0.00 N/A N/A N/A N/A N/A 1.759±0.00 N/A N/A
ENST00000592145 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592426 N/A N/A N/A 0.218±0.00 0.534±0.00 0.952±0.47 N/A N/A 0.637±0.00 1.355±0.00 N/A N/A N/A N/A
ENST00000593110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613721 N/A N/A N/A N/A N/A N/A N/A 0.592±0.00 N/A N/A N/A 0.422±0.00 0.519±0.00 1.136±0.54
ENSG00000108443 ENST00000225577 N/A N/A N/A 1.397±0.00 2.746±0.00 2.359±0.00 0.475±0.00 N/A 2.908±0.00 N/A 1.125±0.00 2.667±0.78 1.547±0.48 N/A
ENST00000393021 4.040±0.00 3.780±0.00 N/A 2.532±1.82 4.738±0.00 2.287±0.00 2.056±1.24 2.862±0.00 2.032±0.00 3.437±0.41 5.424±0.00 2.399±0.73 1.103±0.10 3.585±0.00
ENST00000406116 N/A N/A 1.119±0.00 N/A N/A N/A N/A N/A N/A N/A 1.658±0.00 N/A N/A N/A
ENST00000443572 N/A N/A 1.711±0.00 1.794±0.00 2.137±0.00 N/A N/A 1.787±0.00 N/A 2.893±0.00 1.194±0.00 N/A 2.352±0.23 N/A
ENST00000472940 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475155 N/A N/A N/A N/A N/A 9.558±0.00 N/A 6.231±0.00 N/A N/A N/A N/A N/A N/A
ENST00000477179 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000241913 ENST00000496272 N/A 0.433±0.00 N/A 0.115±0.00 0.433±0.00 N/A N/A N/A N/A 0.772±0.00 N/A 0.417±0.00 N/A 0.349±0.00
ENSG00000270264 ENST00000605113 N/A 0.304±0.00 N/A 0.160±0.12 1.501±1.36 N/A 0.087±0.05 0.659±0.52 2.521±0.00 7.196±0.00 N/A 0.631±0.81 0.267±0.00 N/A

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