C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00057K_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000119185-ENSG00000119203 CGP 9606 2:9403475-9473101
GeneTranscriptPositionBiotype
ENSG00000119203 (CPSF3)
cleavage and polyadenylation specific factor 3, 73kDa
ENST00000238112 (CPSF3-001) 9423568-9473101 protein_coding
ENST00000460593 (CPSF3-002) 9423884-9473092 protein_coding
ENST00000475482 (CPSF3-003) 9423651-9432688 protein_coding
ENST00000489403 (CPSF3-005) 9456977-9473098 processed_transcript
ENST00000489629 (CPSF3-004) 9441730-9448350 retained_intron
ENSG00000151693 (ASAP2)
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
ENST00000281419 (ASAP2-001) 9206765-9405678 protein_coding
ENST00000315273 (ASAP2-201) 9206765-9405683 protein_coding
ENST00000471687 (ASAP2-003) 9350459-9356303 retained_intron
ENST00000484590 (ASAP2-002) 9398841-9405677 retained_intron
ENST00000491413 (ASAP2-004) 9388294-9400769 processed_transcript
CIL_00057K_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062352-ENSMUSG00000054309 CGP 10090 12:21240825-21315056
GeneTranscriptPositionBiotype
ENSMUSG00000052632 (Asap2)
ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
ENSMUST00000050990 (Asap2-006) 21111954-21268179 protein_coding
ENSMUST00000064595 (Asap2-001) 21111748-21270171 protein_coding
ENSMUST00000090834 (Asap2-002) 21111756-21270171 protein_coding
ENSMUST00000101562 (Asap2-004) 21111748-21270171 protein_coding
ENSMUSG00000054309 (Cpsf3)
cleavage and polyadenylation specificity factor 3
ENSMUST00000067284 (Cpsf3-201) 21286297-21315056 protein_coding
ENSMUSG00000062352 (Itgb1bp1)
integrin beta 1 binding protein 1
ENSMUST00000076260 (Itgb1bp1-001) 21269806-21286237 protein_coding
ENSMUST00000172834 (Itgb1bp1-006) 21271288-21286185 protein_coding
ENSMUST00000172962 (Itgb1bp1-003) 21240825-21247323 processed_transcript
ENSMUST00000173614 (Itgb1bp1-007) 21271426-21272770 retained_intron
ENSMUST00000173688 (Itgb1bp1-005) 21270704-21272123 protein_coding
ENSMUST00000173729 (Itgb1bp1-004) 21270093-21286097 protein_coding
ENSMUSG00000070166 (Gm25821)
predicted gene, 25821
ENSMUST00000093657 (Gm25821-201) 21287927-21288059 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057K_0001ENSG00000119203ENST00000238112ENST00000460593ENST00000475482ENST00000489403ENST00000489629ENSG00000151693ENST00000281419ENST00000315273ENST00000471687ENST00000484590ENST00000491413CIL_00057K_0002ENSMUSG00000052632ENSMUST00000050990ENSMUST00000064595ENSMUST00000090834ENSMUST00000101562ENSMUSG00000054309ENSMUST00000067284ENSMUSG00000062352ENSMUST00000076260ENSMUST00000172834ENSMUST00000172962ENSMUST00000173614ENSMUST00000173688ENSMUST00000173729ENSMUSG00000070166ENSMUST00000093657
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00057K_0001ENSG00000119203ENST00000238112ENST00000460593ENST00000475482ENST00000489403ENST00000489629ENSG00000151693ENST00000281419ENST00000315273CIL_00057K_0002ENSMUSG00000052632ENSMUST00000050990ENSMUST00000064595ENSMUST00000090834ENSMUST00000101562ENSMUSG00000054309ENSMUST00000067284ENSMUSG00000062352ENSMUST00000076260ENSMUST00000172834ENSMUST00000173729ENSMUSG00000070166ENSMUST00000093657
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000119203 ENST00000238112 8.610±0.00 9.140±0.00 1.779±0.00 4.483±1.00 6.710±3.62 4.453±0.82 2.665±2.32 6.650±3.74 4.334±0.15 2.286±0.30 3.610±2.61 6.571±2.10 9.355±2.67 23.851±6.16
ENST00000460593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.093±0.00
ENST00000475482 N/A N/A 1.032±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 43.093±0.00 41.854±0.00 122.870±0.00
ENST00000489629 N/A N/A N/A N/A 3.561±0.00 N/A N/A N/A N/A N/A 5.115±0.00 N/A N/A N/A
ENSG00000151693 ENST00000281419 3.820±0.00 1.713±0.00 3.784±0.00 2.871±0.04 4.038±0.00 2.780±1.08 0.516±0.00 4.000±0.00 1.344±0.00 1.392±0.02 N/A 3.225±1.30 2.833±0.91 6.277±0.00
ENST00000315273 N/A N/A N/A N/A N/A 3.289±0.00 0.629±0.00 N/A N/A N/A 0.414±0.00 1.428±0.00 N/A N/A
ENST00000471687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491413 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000052632 ENSMUST00000050990 N/A 2.804±0.00 N/A 10.999±0.00 N/A 6.100±0.00 N/A N/A N/A N/A 0.845±0.00 2.021±0.00 5.667±1.89 12.648±0.00
ENSMUST00000064595 1.791±0.00 N/A N/A 2.218±0.22 1.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000090834 2.880±0.00 2.937±0.84 4.395±0.86 N/A 2.142±0.81 6.982±0.00 N/A 1.240±0.00 0.961±0.30 3.675±0.98 0.493±0.01 2.661±0.55 0.806±0.01 N/A
ENSMUST00000101562 4.140±0.00 4.212±0.00 11.393±2.82 11.019±5.47 1.771±0.81 3.402±1.23 1.056±0.00 3.116±1.25 2.208±0.83 7.223±0.41 0.781±0.12 2.937±0.60 1.336±0.07 N/A
ENSMUSG00000054309 ENSMUST00000067284 14.271±4.52 9.243±4.28 24.158±9.23 23.045±14.17 7.711±2.05 7.011±2.57 6.999±1.85 10.501±3.30 14.104±8.50 10.747±1.29 4.619±1.18 10.348±9.84 13.964±2.82 11.468±1.05
ENSMUSG00000062352 ENSMUST00000076260 13.050±3.48 15.374±2.73 8.689±0.00 7.876±0.03 6.824±0.54 N/A 4.685±0.75 7.074±1.75 4.311±0.88 11.246±1.14 1.835±0.36 6.315±0.91 4.368±1.43 32.914±5.27
ENSMUST00000172834 N/A N/A N/A N/A N/A N/A N/A N/A 7.285±1.39 N/A 9.354±2.18 19.064±0.86 9.717±3.55 28.772±9.04
ENSMUST00000172962 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173614 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000173729 14.669±5.40 10.219±1.67 N/A N/A 6.507±1.98 N/A 3.945±0.57 4.594±0.45 N/A N/A 2.839±0.55 6.372±1.18 2.303±0.02 30.421±7.60
ENSMUSG00000070166 ENSMUST00000093657 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 25.232±6.00 15.222±0.00 N/A

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