C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00058A_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000073824-ENSDARG00000041108 CGP 7955 18:26124358-26215014
GeneTranscriptPositionBiotype
ENSDARG00000041108 (ctsh)
cathepsin H 		ENSDART00000060245 (ctsh-001) 26208613-26215014 protein_coding
ENSDART00000140111 (ctsh-002) 26211628-26213126 processed_transcript
ENSDARG00000073824 (RASGRF1)
Ras protein-specific guanine nucleotide-releasing factor 1 		ENSDART00000109257 (RASGRF1-001) 26124358-26205126 protein_coding
CIL_00058A_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000032356-ENSMUSG00000032359 CGP 10090 9:89909908-90076089
GeneTranscriptPositionBiotype
ENSMUSG00000032356 (Rasgrf1)
RAS protein-specific guanine nucleotide-releasing factor 1 		ENSMUST00000034909 (Rasgrf1-002) 89909909-89915834 protein_coding
ENSMUST00000034912 (Rasgrf1-001) 89909909-90026977 protein_coding
ENSMUST00000189545 (Rasgrf1-003) 89909908-89915847 protein_coding
ENSMUST00000190073 (Rasgrf1-004) 89909912-89926740 retained_intron
ENSMUSG00000032359 (Ctsh)
cathepsin H 		ENSMUST00000034915 (Ctsh-001) 90054267-90076089 protein_coding
ENSMUST00000123320 (Ctsh-003) 90054538-90076087 nonsense_mediated_decay
ENSMUST00000127842 (Ctsh-002) 90054506-90076087 retained_intron
ENSMUST00000132718 (Ctsh-004) 90054152-90065422 protein_coding
ENSMUST00000142750 (Ctsh-006) 90062522-90071885 retained_intron
ENSMUST00000143172 (Ctsh-005) 90054537-90064239 protein_coding
ENSMUST00000151219 (Ctsh-007) 90071696-90075749 retained_intron
ENSMUST00000185459 (Ctsh-011) 90054559-90075741 protein_coding
ENSMUST00000186126 (Ctsh-008) 90054521-90055338 retained_intron
ENSMUST00000187437 (Ctsh-009) 90060153-90061623 retained_intron
ENSMUST00000190338 (Ctsh-010) 90054554-90067344 retained_intron
ENSMUSG00000088976 (Gm23759)
predicted gene, 23759 		ENSMUST00000158351 (Gm23759-201) 90031307-90031574 misc_RNA
ENSMUSG00000100060 (RP23-118J13.2)
predicted gene, 17944 		ENSMUST00000186351 (RP23-118J13.2-001) 90033243-90033885 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058A_0001ENSDARG00000041108ENSDART00000060245ENSDART00000140111ENSDARG00000073824ENSDART00000109257CIL_00058A_0002ENSMUSG00000032356ENSMUST00000034909ENSMUST00000034912ENSMUST00000189545ENSMUST00000190073ENSMUSG00000032359ENSMUST00000034915ENSMUST00000123320ENSMUST00000127842ENSMUST00000132718ENSMUST00000142750ENSMUST00000143172ENSMUST00000151219ENSMUST00000185459ENSMUST00000186126ENSMUST00000187437ENSMUST00000190338ENSMUSG00000088976ENSMUST00000158351ENSMUSG00000100060ENSMUST00000186351
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00058A_0001ENSDARG00000041108ENSDART00000060245ENSDART00000140111ENSDARG00000073824ENSDART00000109257CIL_00058A_0002ENSMUSG00000032356ENSMUST00000034909ENSMUST00000034912ENSMUST00000189545ENSMUSG00000032359ENSMUST00000034915ENSMUST00000123320ENSMUST00000127842ENSMUST00000132718ENSMUST00000142750ENSMUST00000151219ENSMUST00000185459ENSMUSG00000088976ENSMUST00000158351ENSMUSG00000100060ENSMUST00000186351
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000041108 ENSDART00000060245 N/A N/A N/A 5.304±1.39 N/A N/A 23.476±2.94 67.380±63.41 0.498±0.00 N/A 9.292±0.00 N/A N/A N/A
ENSDART00000140111 N/A N/A N/A 1.162±0.00 N/A N/A N/A N/A 0.679±0.00 N/A N/A N/A N/A N/A
ENSDARG00000073824 ENSDART00000109257 N/A N/A N/A 20.446±0.00 N/A N/A 0.024±0.00 0.079±0.00 0.026±0.00 N/A 2.096±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000032356 ENSMUST00000034909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A N/A N/A
ENSMUST00000034912 0.180±0.20 1.897±0.63 0.164±0.00 60.495±84.99 2.395±0.41 0.032±0.01 0.015±0.00 0.010±0.00 0.012±0.01 0.192±0.12 0.010±0.00 0.212±0.11 0.352±0.24 0.444±0.22
ENSMUST00000189545 0.210±0.20 2.514±0.60 0.226±0.03 0.836±0.01 2.742±0.32 0.011±0.00 0.005±0.00 0.009±0.01 0.009±0.01 0.163±0.01 0.011±0.00 0.079±0.03 0.138±0.07 N/A
ENSMUST00000190073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000032359 ENSMUST00000034915 26.450±5.40 17.588±4.88 51.111±5.19 N/A 23.507±3.30 10.572±4.43 6.194±2.38 23.200±0.00 37.684±23.83 34.489±1.64 0.715±0.14 10.642±4.39 99.204±28.15 2.559±0.71
ENSMUST00000123320 N/A N/A 18.735±0.00 2.641±0.00 33.950±0.00 N/A 6.343±0.00 N/A 15.860±0.00 N/A 0.727±0.00 29.584±6.57 3.598±1.43 0.246±0.00
ENSMUST00000127842 2.578±0.38 1.655±0.00 N/A N/A 4.951±1.04 N/A 0.794±0.06 N/A N/A 6.266±0.89 N/A 2.401±0.00 N/A 0.049±0.00
ENSMUST00000132718 N/A 26.775±6.05 N/A N/A 51.225±4.99 26.460±5.34 N/A 39.423±3.63 43.488±0.00 64.753±9.44 N/A 21.018±3.00 N/A N/A
ENSMUST00000142750 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.158±0.89 N/A N/A
ENSMUST00000143172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151219 N/A N/A N/A 5.805±0.00 N/A N/A N/A N/A N/A N/A N/A 31.762±0.00 22.164±18.28 5.745±0.00
ENSMUST00000185459 N/A N/A N/A N/A 14.750±0.00 N/A N/A N/A N/A N/A N/A 7.243±0.00 N/A N/A
ENSMUST00000186126 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000187437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000190338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088976 ENSMUST00000158351 0.742±0.25 N/A 0.155±0.00 N/A N/A N/A 0.811±0.00 N/A N/A 0.352±0.00 N/A N/A N/A N/A
ENSMUSG00000100060 ENSMUST00000186351 0.172±0.12 N/A 0.081±0.04 N/A 0.283±0.12 0.139±0.05 N/A 0.058±0.00 0.112±0.06 0.102±0.04 N/A 0.279±0.12 0.024±0.00 N/A

Loading