C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: snurportin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000564675 SNUPN-003 ENSG00000169371 9606 - 15:75598122-75625693 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverMuscleOvaryENST00000564675
Transcript ID Brain Colon Heart Liver Muscle Ovary
ENST00000564675 1.313±0.00 1.177±0.00 0.823±0.00 1.133±0.00 2.756±0.00 2.441±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A2 CIL_0005A2_0002 CGP 15:75463251-75626469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000339 TAS RNA cap binding
GO:0000387 TAS spliceosomal snRNP assembly
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005643 TAS nuclear pore
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006606 IEA protein import into nucleus
GO:0008565 IEA protein transporter activity
GO:0010467 TAS gene expression
GO:0016070 TAS RNA metabolic process
GO:0034660 TAS ncRNA metabolic process
GO:0061015 IEA snRNA import into nucleus
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068856 Snupn-001 protein_coding Mus_musculus 0 1354

Loading