C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005A5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000165997-ENSG00000204740 CGP 9606 10:18659405-19790401
GeneTranscriptPositionBiotype
ENSG00000165997 (ARL5B)
ADP-ribosylation factor-like 5B 		ENST00000377275 (ARL5B-001) 18659405-18681639 protein_coding
ENSG00000204740 (MALRD1)
MAM and LDL receptor class A domain containing 1 		ENST00000377265 (MALRD1-002) 19489094-19734476 protein_coding
ENST00000377266 (MALRD1-001) 19203850-19734237 protein_coding
ENST00000418367 (MALRD1-005) 19730574-19734478 protein_coding
ENST00000441070 (MALRD1-004) 19352168-19491572 protein_coding
ENST00000454679 (MALRD1-201) 19048771-19734478 protein_coding
ENST00000480707 (MALRD1-006) 19692310-19790401 processed_transcript
ENST00000492202 (MALRD1-003) 19488595-19531302 processed_transcript
ENSG00000225509 (AIFM1P1)
apoptosis-inducing factor, mitochondrion-associated, 1 pseudogene 1 		ENST00000413342 (AIFM1P1-001) 18735745-18738631 processed_pseudogene
ENSG00000226255 (UBE2V2P1)
ubiquitin-conjugating enzyme E2 variant 2 pseudogene 1 		ENST00000434717 (UBE2V2P1-001) 19051455-19052170 processed_pseudogene
ENSG00000227734 (RP11-49L2.1)
 ENST00000426818 (RP11-49L2.1-001) 19290223-19291480 antisense
ENSG00000230818 (MTND2P16)
MT-ND2 pseudogene 16 		ENST00000419987 (MTND2P16-001) 19747823-19748621 processed_pseudogene
ENSG00000233968 (RP11-354E11.2)
 ENST00000423551 (RP11-354E11.2-003) 19721978-19728550 antisense
ENST00000431157 (RP11-354E11.2-002) 19721588-19728550 antisense
ENST00000451713 (RP11-354E11.2-001) 19710328-19728550 antisense
ENSG00000234244 (RP11-139J15.5)
 ENST00000427232 (RP11-139J15.5-001) 18746433-18747853 lincRNA
ENSG00000234813 (RP11-288D15.1)
 ENST00000441557 (RP11-288D15.1-001) 18940501-18940953 processed_pseudogene
ENSG00000236960 (RP11-265G8.3)
 ENST00000427935 (RP11-265G8.3-001) 19491072-19491299 processed_pseudogene
ENSG00000252001 (RNA5SP303)
RNA, 5S ribosomal pseudogene 303 		ENST00000516192 (RNA5SP303-201) 19633683-19633812 rRNA
CIL_0005A5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000017418-ENSMUSG00000075520 CGP 10090 2:15049395-16150806
GeneTranscriptPositionBiotype
ENSMUSG00000017418 (Arl5b)
ADP-ribosylation factor-like 5B 		ENSMUST00000017562 (Arl5b-002) 15049395-15078371 protein_coding
ENSMUST00000069870 (Arl5b-001) 15055282-15082456 protein_coding
ENSMUST00000128682 (Arl5b-003) 15055287-15076277 nonsense_mediated_decay
ENSMUST00000129509 (Arl5b-004) 15068169-15076584 nonsense_mediated_decay
ENSMUSG00000026707 (Nsun6)
NOL1/NOP2/Sun domain family member 6 		ENSMUST00000028034 (Nsun6-001) 14995131-15049285 protein_coding
ENSMUST00000076435 (Nsun6-002) 14996300-15054884 protein_coding
ENSMUST00000114713 (Nsun6-004) 15036435-15049312 protein_coding
ENSMUST00000114715 (Nsun6-003) 14996298-15054872 protein_coding
ENSMUSG00000075520 (Malrd1)
MAM and LDL receptor class A domain containing 1 		ENSMUST00000146205 (Malrd1-001) 16042126-16150806 protein_coding
ENSMUSG00000081245 (Gm6587)
predicted gene 6587 		ENSMUST00000120219 (Gm6587-001) 15956923-15957501 processed_pseudogene
ENSMUSG00000081389 (Gm13368)
predicted gene 13368 		ENSMUST00000122443 (Gm13368-001) 15481910-15482336 processed_pseudogene
ENSMUSG00000082632 (Gm13365)
predicted gene 13365 		ENSMUST00000121188 (Gm13365-001) 15396750-15397716 processed_pseudogene
ENSMUSG00000083860 (Gm13313)
predicted gene 13313 		ENSMUST00000118938 (Gm13313-001) 15127607-15128678 processed_pseudogene
ENSMUSG00000085942 (Malrd1)
 ENSMUST00000147499 (Malrd1-001) 15646962-15696710 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A5_0001ENSG00000165997ENST00000377275ENSG00000204740ENST00000377265ENST00000377266ENST00000418367ENST00000441070ENST00000454679ENST00000480707ENST00000492202ENSG00000225509ENST00000413342ENSG00000226255ENST00000434717ENSG00000227734ENST00000426818ENSG00000230818ENST00000419987ENSG00000233968ENST00000423551ENST00000431157ENST00000451713ENSG00000234244ENST00000427232ENSG00000234813ENST00000441557ENSG00000236960ENST00000427935ENSG00000252001ENST00000516192CIL_0005A5_0002ENSMUSG00000017418ENSMUST00000017562ENSMUST00000069870ENSMUST00000128682ENSMUST00000129509ENSMUSG00000026707ENSMUST00000028034ENSMUST00000076435ENSMUST00000114713ENSMUST00000114715ENSMUSG00000075520ENSMUST00000146205ENSMUSG00000081245ENSMUST00000120219ENSMUSG00000081389ENSMUST00000122443ENSMUSG00000082632ENSMUST00000121188ENSMUSG00000083860ENSMUST00000118938ENSMUSG00000085942ENSMUST00000147499
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005A5_0001ENSG00000165997ENST00000377275ENSG00000204740ENST00000377265ENST00000377266ENST00000418367ENST00000454679ENST00000480707ENST00000492202ENSG00000225509ENST00000413342ENSG00000226255ENST00000434717ENSG00000227734ENST00000426818ENSG00000230818ENST00000419987ENSG00000233968ENST00000423551ENST00000431157ENST00000451713ENSG00000234244ENST00000427232ENSG00000234813ENST00000441557ENSG00000236960ENST00000427935ENSG00000252001ENST00000516192CIL_0005A5_0002ENSMUSG00000017418ENSMUST00000017562ENSMUST00000069870ENSMUST00000128682ENSMUST00000129509ENSMUSG00000026707ENSMUST00000028034ENSMUST00000076435ENSMUST00000114713ENSMUST00000114715ENSMUSG00000075520ENSMUST00000146205ENSMUSG00000081245ENSMUST00000120219ENSMUSG00000081389ENSMUST00000122443ENSMUSG00000082632ENSMUST00000121188ENSMUSG00000083860ENSMUST00000118938ENSMUSG00000085942ENSMUST00000147499
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000165997 ENST00000377275 3.407±0.00 1.601±0.00 N/A 1.877±0.26 1.383±0.29 2.038±0.25 1.184±0.54 2.394±0.06 2.553±0.27 2.382±0.73 0.641±0.33 4.478±2.25 2.338±0.29 1.820±0.83
ENSG00000204740 ENST00000377265 N/A 0.018±0.00 0.560±0.00 0.166±0.00 0.268±0.08 0.142±0.00 0.133±0.03 0.472±0.00 0.233±0.00 0.153±0.09 N/A 0.309±0.11 0.150±0.09 0.485±0.10
ENST00000377266 N/A N/A N/A 0.039±0.00 N/A 0.026±0.00 N/A N/A N/A 0.208±0.00 N/A N/A N/A N/A
ENST00000418367 N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000441070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454679 N/A N/A N/A 0.005±0.00 N/A 0.033±0.00 N/A N/A 0.035±0.00 N/A N/A 0.018±0.00 0.028±0.00 0.264±0.10
ENST00000480707 N/A N/A N/A N/A N/A N/A N/A 1.519±0.00 N/A N/A N/A N/A N/A N/A
ENST00000492202 0.073±0.00 0.082±0.00 N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A N/A N/A N/A
ENSG00000225509 ENST00000413342 N/A N/A N/A N/A N/A N/A N/A 0.024±0.00 N/A 0.008±0.00 N/A N/A N/A 0.016±0.01
ENSG00000226255 ENST00000434717 N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A 0.026±0.00 N/A N/A N/A N/A 0.107±0.00
ENSG00000227734 ENST00000426818 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00
ENSG00000230818 ENST00000419987 0.014±0.00 0.013±0.00 0.374±0.00 0.014±0.00 N/A N/A 0.025±0.00 0.013±0.00 N/A N/A N/A N/A N/A 0.037±0.03
ENSG00000233968 ENST00000423551 0.055±0.00 0.112±0.00 N/A 0.096±0.00 0.120±0.00 N/A 0.094±0.08 N/A N/A N/A 0.016±0.00 N/A N/A 0.149±0.00
ENST00000431157 N/A N/A N/A N/A 0.226±0.15 N/A N/A 0.086±0.00 0.220±0.00 N/A N/A 0.068±0.00 0.091±0.02 0.139±0.00
ENST00000451713 N/A 0.024±0.00 0.128±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00
ENSG00000234244 ENST00000427232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.209±0.00
ENSG00000234813 ENST00000441557 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.086±0.00
ENSG00000236960 ENST00000427935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A
ENSG00000252001 ENST00000516192 N/A N/A N/A 26.691±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017418 ENSMUST00000017562 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.216±0.00 N/A 0.656±0.00
ENSMUST00000069870 3.474±0.78 1.187±0.29 2.893±0.37 7.418±5.19 1.280±0.53 1.821±0.26 2.276±0.42 1.012±0.60 2.541±0.86 4.689±0.54 1.550±0.33 2.839±1.08 2.856±1.63 0.739±0.32
ENSMUST00000128682 N/A 4.980±3.35 N/A N/A 2.117±0.00 3.432±0.21 N/A N/A N/A 5.123±0.00 N/A 4.166±1.10 N/A 7.139±3.14
ENSMUST00000129509 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.976±1.69
ENSMUSG00000026707 ENSMUST00000028034 1.221±0.28 0.495±0.28 1.193±0.08 2.334±0.19 0.907±0.29 0.554±0.22 0.254±0.05 0.672±0.33 0.655±0.26 1.783±0.10 0.388±0.14 1.011±0.33 0.895±0.54 0.679±0.04
ENSMUST00000076435 N/A N/A N/A 1.764±0.00 N/A N/A N/A 0.194±0.00 N/A N/A N/A 0.852±0.44 1.176±0.51 0.817±0.00
ENSMUST00000114713 0.223±0.00 0.338±0.06 N/A 0.289±0.00 0.395±0.29 0.229±0.09 N/A 0.162±0.00 0.203±0.05 N/A 0.065±0.00 0.230±0.03 N/A N/A
ENSMUST00000114715 0.798±0.04 N/A N/A N/A 0.256±0.04 0.516±0.07 0.183±0.03 N/A 0.278±0.09 0.556±0.00 0.132±0.01 0.840±0.41 1.033±0.00 3.219±1.48
ENSMUSG00000075520 ENSMUST00000146205 N/A N/A N/A 0.076±0.00 N/A 0.619±0.43 N/A 1.719±0.86 0.051±0.00 N/A N/A 0.040±0.00 0.048±0.03 0.160±0.08
ENSMUSG00000081245 ENSMUST00000120219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00
ENSMUSG00000081389 ENSMUST00000122443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00
ENSMUSG00000082632 ENSMUST00000121188 0.055±0.00 N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000083860 ENSMUST00000118938 N/A N/A N/A 0.021±0.00 N/A N/A N/A N/A 0.091±0.10 N/A N/A N/A 0.006±0.00 N/A
ENSMUSG00000085942 ENSMUST00000147499 N/A N/A N/A N/A N/A 0.278±0.02 N/A 0.384±0.24 N/A N/A N/A 0.071±0.00 N/A N/A

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