C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13365
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121188 Gm13365-001 ENSMUSG00000082632 10090 + 2:15396750-15397716 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainENSMUST00000121188
Transcript ID Adipose Brain
ENSMUST00000121188 0.055±0.00 0.028±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005A5 CIL_0005A5_0002 CGP 2:15049395-16150806

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000227157 LDHA-003 protein_coding Homo_sapiens 0 514
ENST00000375710 LDHA-023 retained_intron Homo_sapiens 0 551
ENST00000379412 LDHA-005 protein_coding Homo_sapiens 0 747
ENST00000394996 LDHAP5-001 processed_pseudogene Homo_sapiens 0 518
ENST00000396222 LDHA-002 protein_coding Homo_sapiens 0 488
ENST00000397561 LDHAP4-001 processed_pseudogene Homo_sapiens 0 662
ENST00000422447 LDHA-001 protein_coding Homo_sapiens 0 747
ENST00000430553 LDHA-010 protein_coding Homo_sapiens 0 492
ENST00000460405 LDHA-008 retained_intron Homo_sapiens 0 375
ENST00000478970 LDHA-009 protein_coding Homo_sapiens 0 281
ENST00000486690 LDHA-017 nonsense_mediated_decay Homo_sapiens 0 361
ENST00000494573 LDHA-007 retained_intron Homo_sapiens 0 230
ENST00000495052 LDHA-004 protein_coding Homo_sapiens 0 281
ENST00000535451 LDHA-014 protein_coding Homo_sapiens 0 202
ENST00000536528 LDHA-021 nonsense_mediated_decay Homo_sapiens 0 261
ENST00000537296 LDHA-022 retained_intron Homo_sapiens 0 527
ENST00000538451 LDHA-024 retained_intron Homo_sapiens 0 492
ENST00000539814 LDHA-016 nonsense_mediated_decay Homo_sapiens 0 230
ENST00000540430 LDHA-201 protein_coding Homo_sapiens 0 747
ENST00000541097 LDHA-019 nonsense_mediated_decay Homo_sapiens 0 235
ENST00000542179 LDHA-020 protein_coding Homo_sapiens 0 747
ENST00000543445 LDHA-013 protein_coding Homo_sapiens 0 329
ENST00000543695 LDHA-015 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000545215 LDHA-011 nonsense_mediated_decay Homo_sapiens 0 551

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