C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005BG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000021595-ENSDARG00000007523 CGP 7955 4:21300751-21408343
GeneTranscriptPositionBiotype
ENSDARG00000007523 (kmt2e)
lysine (K)-specific methyltransferase 2E 		ENSDART00000066903 (kmt2e-002) 21360141-21408343 protein_coding
ENSDART00000123369 (kmt2e-001) 21362424-21408343 protein_coding
ENSDART00000130072 (kmt2e-201) 21360143-21408343 protein_coding
ENSDARG00000021595 (lhfpl3)
lipoma HMGIC fusion partner-like 3 		ENSDART00000039277 (lhfpl3-001) 21300751-21355433 protein_coding
CIL_0005BG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187416-ENSG00000005483 CGP 9606 7:104328656-105114361
GeneTranscriptPositionBiotype
ENSG00000005483 (KMT2E)
lysine (K)-specific methyltransferase 2E 		ENST00000257745 (KMT2E-201) 105014190-105114084 protein_coding
ENST00000311117 (KMT2E-001) 105014179-105114085 protein_coding
ENST00000334877 (KMT2E-202) 105014190-105114361 protein_coding
ENST00000334884 (KMT2E-004) 105014190-105114361 nonsense_mediated_decay
ENST00000334914 (KMT2E-203) 105040953-105113333 protein_coding
ENST00000468607 (KMT2E-014) 105062198-105063827 retained_intron
ENST00000473063 (KMT2E-007) 105109040-105110867 protein_coding
ENST00000474203 (KMT2E-012) 105014461-105063377 protein_coding
ENST00000476671 (KMT2E-003) 105014218-105091609 protein_coding
ENST00000478079 (KMT2E-018) 105107900-105110556 nonsense_mediated_decay
ENST00000478990 (KMT2E-009) 105014206-105090132 protein_coding
ENST00000479838 (KMT2E-016) 105101471-105102649 protein_coding
ENST00000480368 (KMT2E-011) 105014207-105040856 processed_transcript
ENST00000482560 (KMT2E-010) 105038126-105090132 nonsense_mediated_decay
ENST00000485619 (KMT2E-013) 105061918-105063386 retained_intron
ENST00000495267 (KMT2E-008) 105014208-105074777 protein_coding
ENST00000496191 (KMT2E-015) 105077116-105077808 retained_intron
ENST00000622386 (KMT2E-204) 105063350-105101478 protein_coding
ENSG00000135250 (SRPK2)
SRSF protein kinase 2 		ENST00000357311 (SRPK2-001) 105116377-105269015 protein_coding
ENST00000393651 (SRPK2-008) 105116376-105388894 protein_coding
ENST00000460391 (SRPK2-013) 105167377-105388894 protein_coding
ENST00000462282 (SRPK2-010) 105203627-105399308 processed_transcript
ENST00000465072 (SRPK2-003) 105115269-105132793 nonsense_mediated_decay
ENST00000465112 (SRPK2-009) 105203694-105388898 nonsense_mediated_decay
ENST00000466917 (SRPK2-004) 105117296-105144066 retained_intron
ENST00000474770 (SRPK2-006) 105117580-105133068 protein_coding
ENST00000476117 (SRPK2-012) 105160301-105203732 retained_intron
ENST00000477925 (SRPK2-007) 105117388-105142336 protein_coding
ENST00000482862 (SRPK2-015) 105203723-105389390 processed_transcript
ENST00000482897 (SRPK2-014) 105160545-105389391 protein_coding
ENST00000485455 (SRPK2-011) 105117349-105203656 processed_transcript
ENST00000489828 (SRPK2-002) 105117526-105298779 protein_coding
ENST00000493638 (SRPK2-005) 105110704-105117479 processed_transcript
ENSG00000187416 (LHFPL3)
lipoma HMGIC fusion partner-like 3 		ENST00000401970 (LHFPL3-002) 104328700-104906754 protein_coding
ENST00000424859 (LHFPL3-001) 104328656-104907232 protein_coding
ENSG00000197258 (EIF4BP6)
eukaryotic translation initiation factor 4B pseudogene 6 		ENST00000431936 (EIF4BP6-001) 104667749-104669576 processed_pseudogene
ENSG00000225329 (RP11-325F22.5)
 ENST00000453666 (RP11-325F22.5-001) 104917560-104926630 lincRNA
ENSG00000226869 (LHFPL3-AS1)
LHFPL3 antisense RNA 1 		ENST00000411448 (LHFPL3-AS1-005) 104768669-104804086 antisense
ENST00000416376 (LHFPL3-AS1-002) 104785212-104804107 antisense
ENST00000417290 (LHFPL3-AS1-001) 104796506-104804084 antisense
ENST00000433514 (LHFPL3-AS1-007) 104738597-104757748 antisense
ENST00000434579 (LHFPL3-AS1-003) 104796516-104804107 antisense
ENST00000449764 (LHFPL3-AS1-006) 104738598-104804088 antisense
ENST00000450896 (LHFPL3-AS1-004) 104799393-104803539 retained_intron
ENSG00000228393 (LINC01004)
long intergenic non-protein coding RNA 1004 		ENST00000445184 (LINC01004-002) 104982099-105013024 antisense
ENST00000450686 (LINC01004-001) 104950315-105013044 antisense
ENSG00000237513 (RP11-325F22.2)
 ENST00000415513 (RP11-325F22.2-002) 104941063-104962060 lincRNA
ENST00000417026 (RP11-325F22.2-001) 104941206-104962334 lincRNA
ENSG00000237606 (RP11-203P23.2)
 ENST00000431233 (RP11-203P23.2-001) 104826336-104826796 processed_pseudogene
ENSG00000243352 (RN7SL8P)
RNA, 7SL, cytoplasmic 8, pseudogene 		ENST00000461771 (RN7SL8P-201) 104911928-104912193 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BG_0001ENSDARG00000007523ENSDART00000066903ENSDART00000123369ENSDART00000130072ENSDARG00000021595ENSDART00000039277CIL_0005BG_0002ENSG00000005483ENST00000257745ENST00000311117ENST00000334877ENST00000334884ENST00000334914ENST00000468607ENST00000473063ENST00000474203ENST00000476671ENST00000478079ENST00000478990ENST00000479838ENST00000480368ENST00000482560ENST00000485619ENST00000495267ENST00000496191ENST00000622386ENSG00000135250ENST00000357311ENST00000393651ENST00000460391ENST00000462282ENST00000465072ENST00000465112ENST00000466917ENST00000474770ENST00000476117ENST00000477925ENST00000482862ENST00000482897ENST00000485455ENST00000489828ENST00000493638ENSG00000187416ENST00000401970ENST00000424859ENSG00000197258ENST00000431936ENSG00000225329ENST00000453666ENSG00000226869ENST00000411448ENST00000416376ENST00000417290ENST00000433514ENST00000434579ENST00000449764ENST00000450896ENSG00000228393ENST00000445184ENST00000450686ENSG00000237513ENST00000415513ENST00000417026ENSG00000237606ENST00000431233ENSG00000243352ENST00000461771
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005BG_0001ENSDARG00000007523ENSDART00000066903ENSDART00000123369ENSDART00000130072ENSDARG00000021595ENSDART00000039277CIL_0005BG_0002ENSG00000005483ENST00000257745ENST00000311117ENST00000334877ENST00000334884ENST00000334914ENST00000622386ENSG00000135250ENST00000357311ENST00000393651ENST00000466917ENST00000489828ENSG00000187416ENST00000401970ENST00000424859ENSG00000197258ENST00000431936ENSG00000225329ENST00000453666ENSG00000226869ENST00000411448ENST00000416376ENST00000417290ENST00000433514ENST00000434579ENST00000449764ENSG00000228393ENST00000445184ENST00000450686ENSG00000237513ENST00000415513ENST00000417026ENSG00000237606ENST00000431233ENSG00000243352ENST00000461771
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007523 ENSDART00000066903 N/A N/A N/A 3.461±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000123369 N/A N/A N/A 9.086±6.89 N/A N/A 4.418±2.95 2.514±0.00 N/A N/A 3.276±0.00 N/A N/A N/A
ENSDART00000130072 N/A N/A N/A 5.557±0.20 N/A N/A 0.880±0.01 1.305±0.20 0.452±0.00 N/A N/A N/A N/A N/A
ENSDARG00000021595 ENSDART00000039277 N/A N/A N/A 91.832±26.56 N/A N/A 0.103±0.05 0.128±0.04 0.044±0.00 N/A 2.096±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000005483 ENST00000257745 9.591±0.00 6.105±0.00 N/A N/A 5.062±0.00 7.397±0.00 2.144±0.00 5.617±0.00 1.456±0.00 N/A 4.897±0.00 8.721±3.93 3.342±2.25 9.361±0.00
ENST00000311117 N/A N/A 4.555±0.00 N/A 6.803±0.00 4.280±0.00 N/A 1.779±0.00 6.102±0.00 N/A 1.356±0.00 N/A 1.296±0.00 N/A
ENST00000334877 3.460±0.00 2.790±0.00 N/A 4.706±0.00 3.774±0.08 3.274±0.29 2.041±0.55 1.683±0.48 6.123±0.00 6.090±0.00 N/A 6.994±0.65 N/A N/A
ENST00000334884 N/A N/A N/A N/A N/A N/A N/A N/A 0.606±0.00 N/A N/A 8.346±0.00 N/A N/A
ENST00000334914 N/A N/A 3.585±0.00 N/A N/A N/A 1.746±0.53 N/A N/A 6.108±0.00 3.381±0.00 3.920±0.00 1.087±0.00 N/A
ENST00000468607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473063 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476671 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478079 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478990 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482560 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485619 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495267 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622386 N/A N/A N/A N/A 10.520±0.00 N/A N/A N/A N/A N/A N/A 26.837±0.00 14.664±0.00 N/A
ENSG00000135250 ENST00000357311 N/A N/A N/A 21.590±0.00 N/A 5.819±0.00 N/A N/A N/A 10.203±0.00 3.343±0.00 N/A N/A N/A
ENST00000393651 7.508±0.00 6.691±0.00 3.736±0.00 39.284±0.00 6.441±0.34 7.131±0.00 4.523±0.00 3.211±0.67 6.367±3.40 7.763±0.00 N/A 9.075±1.60 5.057±1.00 33.931±11.16
ENST00000460391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465072 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.245±0.00 N/A N/A N/A
ENST00000474770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477925 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489828 N/A N/A N/A 10.740±0.00 N/A N/A 2.541±0.00 N/A N/A N/A N/A N/A 9.094±0.00 67.144±46.97
ENST00000493638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000187416 ENST00000401970 N/A N/A N/A 2.353±0.00 N/A 0.065±0.00 N/A N/A N/A 0.072±0.00 N/A 0.064±0.00 N/A N/A
ENST00000424859 N/A 0.019±0.00 N/A 1.242±0.00 N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 0.060±0.00 0.069±0.03
ENSG00000197258 ENST00000431936 0.124±0.00 0.072±0.00 0.229±0.00 0.101±0.07 0.230±0.11 0.112±0.02 0.216±0.17 0.113±0.03 0.256±0.23 0.103±0.08 0.250±0.07 0.424±0.23 0.044±0.01 0.118±0.08
ENSG00000225329 ENST00000453666 N/A 0.020±0.00 3.118±0.00 N/A 2.442±0.00 1.140±0.85 N/A 5.101±0.00 0.507±0.00 2.713±1.45 N/A 0.547±0.42 0.049±0.01 0.729±0.01
ENSG00000226869 ENST00000411448 N/A N/A 0.564±0.00 N/A N/A N/A N/A N/A N/A 0.369±0.00 N/A N/A N/A 0.044±0.00
ENST00000416376 N/A N/A 0.239±0.00 N/A N/A N/A N/A 0.045±0.00 N/A N/A N/A N/A N/A 0.061±0.00
ENST00000417290 N/A N/A N/A N/A N/A N/A N/A 0.037±0.00 N/A N/A N/A 0.025±0.00 0.025±0.00 N/A
ENST00000433514 N/A N/A N/A 0.030±0.00 0.395±0.00 0.041±0.00 N/A N/A N/A N/A N/A N/A N/A 0.086±0.01
ENST00000434579 N/A N/A N/A N/A N/A N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A
ENST00000449764 N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A N/A N/A N/A N/A 0.032±0.00
ENST00000450896 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228393 ENST00000445184 0.156±0.00 0.872±0.00 N/A 0.374±0.24 N/A 0.617±0.00 0.082±0.02 1.118±0.27 0.328±0.12 0.693±0.64 0.520±0.32 1.420±0.00 0.351±0.10 N/A
ENST00000450686 0.035±0.00 N/A N/A 0.275±0.00 N/A N/A 0.146±0.00 N/A N/A 0.089±0.00 N/A N/A 0.175±0.00 N/A
ENSG00000237513 ENST00000415513 0.450±0.00 0.435±0.00 N/A 0.129±0.06 0.678±0.00 1.609±0.00 N/A 0.106±0.00 0.354±0.30 1.960±0.62 0.597±0.00 0.196±0.06 0.252±0.00 0.464±0.12
ENST00000417026 0.072±0.00 N/A N/A N/A 0.209±0.00 1.514±1.28 0.202±0.02 0.246±0.00 0.081±0.00 1.801±0.00 0.243±0.00 0.116±0.03 0.175±0.05 0.308±0.20
ENSG00000237606 ENST00000431233 N/A N/A 1.971±0.00 0.042±0.00 N/A N/A N/A 0.192±0.00 N/A 1.552±0.00 N/A N/A N/A N/A
ENSG00000243352 ENST00000461771 0.183±0.00 N/A 0.396±0.00 N/A 0.109±0.00 0.291±0.00 0.095±0.00 4.679±0.00 N/A 0.211±0.00 N/A N/A N/A 0.241±0.04

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