C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KDM3B lysine (K)-specific demethylase 3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000043775 Kdm3b-201 ENSMUSG00000038773 10090 + 18:34777008-34839370 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043775
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043775 7.211±1.74 6.120±1.52 12.766±0.73 10.703±3.06 7.017±1.37 8.350±1.80 2.986±0.66 5.239±0.68 4.334±1.94 9.760±1.05 2.488±1.39 9.262±1.45 5.680±2.52 3.659±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005D7 CIL_0005D7_0002 CGP 18:34758906-34839370
CIL_0005D6 CIL_0005D6_0002 CGP 18:34777008-34847463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314358 KDM3B-001 protein_coding Homo_sapiens 0 8043
ENST00000504095 KDM3B-006 retained_intron Homo_sapiens 0 370
ENST00000505756 KDM3B-007 retained_intron Homo_sapiens 0 479
ENST00000507996 KDM3B-004 nonsense_mediated_decay Homo_sapiens 0 3744
ENST00000508386 KDM3B-009 processed_transcript Homo_sapiens 0 394
ENST00000509468 KDM3B-008 retained_intron Homo_sapiens 0 521
ENST00000510866 KDM3B-002 nonsense_mediated_decay Homo_sapiens 0 6543
ENST00000512928 KDM3B-005 retained_intron Homo_sapiens 0 492
ENST00000542866 KDM3B-201 protein_coding Homo_sapiens 0 3910

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