C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DG_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000198792-ENSG00000213923 CGP 9606 22:38219291-38398522
GeneTranscriptPositionBiotype
ENSG00000198792 (TMEM184B)
transmembrane protein 184B 		ENST00000361684 (TMEM184B-004) 38219324-38272664 protein_coding
ENST00000361906 (TMEM184B-001) 38219291-38273034 protein_coding
ENST00000403210 (TMEM184B-006) 38226779-38246738 protein_coding
ENST00000411679 (TMEM184B-010) 38245935-38272938 nonsense_mediated_decay
ENST00000436674 (TMEM184B-003) 38219312-38273010 nonsense_mediated_decay
ENST00000457534 (TMEM184B-009) 38230718-38273005 nonsense_mediated_decay
ENST00000464059 (TMEM184B-007) 38225520-38239502 processed_transcript
ENST00000466117 (TMEM184B-005) 38246716-38273005 retained_intron
ENST00000474416 (TMEM184B-008) 38226599-38231456 retained_intron
ENST00000488844 (TMEM184B-011) 38226380-38231318 retained_intron
ENST00000504337 (TMEM184B-012) 38220975-38222932 processed_transcript
ENSG00000213923 (CSNK1E)
casein kinase 1, epsilon 		ENST00000359867 (CSNK1E-003) 38290691-38318084 protein_coding
ENST00000366216 (CSNK1E-006) 38291930-38294527 protein_coding
ENST00000396832 (CSNK1E-201) 38290692-38317408 protein_coding
ENST00000400206 (CSNK1E-001) 38291367-38398522 protein_coding
ENST00000403904 (CSNK1E-002) 38293250-38317439 protein_coding
ENST00000405675 (CSNK1E-005) 38296206-38317439 protein_coding
ENST00000413574 (CSNK1E-004) 38296205-38317411 protein_coding
ENST00000430335 (CSNK1E-008) 38299956-38316973 protein_coding
ENST00000431611 (CSNK1E-011) 38293260-38300763 nonsense_mediated_decay
ENST00000431632 (CSNK1E-016) 38292314-38298852 protein_coding
ENST00000442216 (CSNK1E-014) 38297602-38300025 nonsense_mediated_decay
ENST00000451964 (CSNK1E-009) 38298029-38303009 protein_coding
ENST00000494610 (CSNK1E-012) 38293903-38294534 retained_intron
ENST00000495232 (CSNK1E-013) 38292909-38294459 retained_intron
ENST00000498529 (CSNK1E-015) 38296626-38300065 processed_transcript
ENST00000612795 (CSNK1E-010) 38298580-38302990 retained_intron
ENSG00000229955 (RP1-5O6.4)
 ENST00000454123 (RP1-5O6.4-001) 38387918-38388857 sense_intronic
ENSG00000241693 (RN7SL704P)
RNA, 7SL, cytoplasmic 704, pseudogene 		ENST00000478699 (RN7SL704P-201) 38231720-38231993 misc_RNA
ENSG00000265311 (AL020993.1)
 ENST00000579493 (AL020993.1-201) 38274339-38274424 miRNA
ENSG00000277385 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000622344 (Metazoa_SRP.1-424) 38281028-38281289 misc_RNA
ENSG00000279038 (RP1-5O6.6)
 ENST00000624867 (RP1-5O6.6-001) 38259960-38266759 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0005DG_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000009035-ENSMUSG00000022433 CGP 10090 15:79360684-79443919
GeneTranscriptPositionBiotype
ENSMUSG00000009035 (Tmem184b)
transmembrane protein 184b 		ENSMUST00000074991 (Tmem184b-201) 79360684-79403303 protein_coding
ENSMUST00000178522 (Tmem184b-202) 79360684-79402919 protein_coding
ENSMUSG00000022433 (Csnk1e)
casein kinase 1, epsilon 		ENSMUST00000117786 (Csnk1e-001) 79417856-79441999 protein_coding
ENSMUST00000120859 (Csnk1e-003) 79419166-79442002 protein_coding
ENSMUST00000122044 (Csnk1e-002) 79422481-79441818 protein_coding
ENSMUST00000127155 (Csnk1e-010) 79419149-79421315 retained_intron
ENSMUST00000135519 (Csnk1e-004) 79426468-79441818 protein_coding
ENSMUST00000136003 (Csnk1e-006) 79424856-79429867 retained_intron
ENSMUST00000137028 (Csnk1e-008) 79424738-79426444 retained_intron
ENSMUST00000144790 (Csnk1e-005) 79426399-79439018 protein_coding
ENSMUST00000145740 (Csnk1e-009) 79423644-79424299 retained_intron
ENSMUST00000156043 (Csnk1e-011) 79430061-79443919 protein_coding
ENSMUST00000156513 (Csnk1e-007) 79424166-79425559 retained_intron
ENSMUSG00000088901 (Mir1943)
microRNA 1943 		ENSMUST00000158276 (Mir1943-201) 79375228-79375300 miRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DG_0001ENSG00000198792ENST00000361684ENST00000361906ENST00000403210ENST00000411679ENST00000436674ENST00000457534ENST00000464059ENST00000466117ENST00000474416ENST00000488844ENST00000504337ENSG00000213923ENST00000359867ENST00000366216ENST00000396832ENST00000400206ENST00000403904ENST00000405675ENST00000413574ENST00000430335ENST00000431611ENST00000431632ENST00000442216ENST00000451964ENST00000494610ENST00000495232ENST00000498529ENST00000612795ENSG00000229955ENST00000454123ENSG00000241693ENST00000478699ENSG00000265311ENST00000579493ENSG00000277385ENST00000622344ENSG00000279038ENST00000624867CIL_0005DG_0002ENSMUSG00000009035ENSMUST00000074991ENSMUST00000178522ENSMUSG00000022433ENSMUST00000117786ENSMUST00000120859ENSMUST00000122044ENSMUST00000127155ENSMUST00000135519ENSMUST00000136003ENSMUST00000137028ENSMUST00000144790ENSMUST00000145740ENSMUST00000156043ENSMUST00000156513ENSMUSG00000088901ENSMUST00000158276
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DG_0001ENSG00000198792ENST00000361684ENST00000361906ENST00000403210ENST00000436674ENST00000504337ENSG00000213923ENST00000359867ENST00000366216ENST00000396832ENST00000403904ENST00000405675ENST00000413574ENST00000430335ENST00000431632ENST00000451964ENST00000495232ENSG00000229955ENST00000454123ENSG00000241693ENST00000478699ENSG00000265311ENST00000579493ENSG00000277385ENST00000622344ENSG00000279038ENST00000624867CIL_0005DG_0002ENSMUSG00000009035ENSMUST00000074991ENSMUST00000178522ENSMUSG00000022433ENSMUST00000117786ENSMUST00000120859ENSMUST00000122044ENSMUST00000136003ENSMUSG00000088901ENSMUST00000158276
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000198792 ENST00000361684 N/A N/A 0.825±0.00 5.559±0.00 N/A 2.790±0.00 0.745±0.00 N/A 1.678±0.00 8.280±0.00 N/A 7.924±5.89 N/A 1.127±0.00
ENST00000361906 32.546±0.00 9.201±0.00 0.786±0.00 7.901±4.13 10.846±9.98 7.303±0.00 7.541±0.00 13.462±0.00 1.836±0.65 14.263±11.36 7.175±4.45 13.570±9.95 35.121±6.54 5.094±3.08
ENST00000403210 N/A N/A 8.461±0.00 N/A N/A N/A 2.251±0.00 N/A 4.145±0.00 6.128±0.00 N/A 6.951±0.00 N/A N/A
ENST00000411679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436674 6.661±0.00 4.594±0.00 N/A 5.755±0.00 5.141±2.50 4.344±2.27 1.246±1.03 N/A N/A N/A N/A N/A N/A 1.874±0.00
ENST00000457534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464059 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474416 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488844 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.412±0.00
ENSG00000213923 ENST00000359867 N/A N/A 0.757±0.00 3.447±0.00 1.174±0.00 N/A 0.447±0.00 N/A N/A N/A N/A 2.830±0.00 N/A N/A
ENST00000366216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.130±0.00 N/A N/A N/A
ENST00000396832 43.679±0.00 16.896±0.00 N/A 25.027±0.00 20.275±0.00 10.582±9.73 11.907±0.00 10.683±0.00 2.014±1.08 55.897±0.00 18.257±0.00 35.435±8.38 19.388±5.99 13.292±7.13
ENST00000400206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000403904 35.863±0.00 N/A N/A 19.469±13.28 N/A 26.304±0.00 8.381±6.22 1.063±0.00 2.120±0.00 40.835±35.47 11.038±7.93 16.630±13.23 15.766±0.00 15.482±2.71
ENST00000405675 N/A 14.490±0.00 N/A N/A 8.311±5.83 1.227±0.00 N/A N/A 1.364±0.58 N/A N/A 13.527±0.00 6.487±0.00 N/A
ENST00000413574 N/A N/A 1.343±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430335 N/A N/A N/A N/A 3.716±0.00 N/A N/A N/A N/A N/A 4.000±0.00 N/A N/A N/A
ENST00000431611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431632 N/A N/A N/A N/A N/A N/A N/A 2.216±0.00 N/A N/A N/A N/A N/A N/A
ENST00000442216 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 52.262±0.00 22.790±0.00 15.111±0.00
ENST00000494610 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495232 N/A N/A 3.423±0.00 N/A 5.919±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498529 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000229955 ENST00000454123 N/A 0.019±0.00 0.396±0.00 N/A 0.125±0.00 0.385±0.00 0.116±0.02 0.542±0.00 0.384±0.00 0.389±0.00 N/A 0.045±0.00 N/A 0.225±0.08
ENSG00000241693 ENST00000478699 0.164±0.00 0.180±0.00 3.186±0.00 N/A 0.292±0.00 N/A N/A 0.189±0.00 N/A 0.861±0.00 N/A N/A 0.381±0.00 N/A
ENSG00000265311 ENST00000579493 N/A 0.411±0.00 N/A N/A 0.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277385 ENST00000622344 0.618±0.00 2.226±0.00 N/A 1.105±0.00 0.344±0.00 1.481±0.00 0.153±0.00 1.217±0.00 0.461±0.00 0.496±0.00 N/A N/A 0.114±0.00 1.196±0.00
ENSG00000279038 ENST00000624867 0.056±0.00 0.214±0.00 0.250±0.00 0.169±0.11 0.156±0.05 0.158±0.12 0.073±0.04 0.086±0.04 0.170±0.13 0.295±0.23 0.088±0.08 0.143±0.13 0.025±0.02 0.092±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009035 ENSMUST00000074991 25.737±7.94 39.740±3.86 16.558±7.86 6.040±2.15 42.460±12.16 30.942±1.46 11.178±1.59 11.750±1.20 7.484±2.93 54.656±10.74 6.638±1.59 30.304±8.22 5.790±2.03 2.106±1.18
ENSMUST00000178522 N/A N/A N/A 5.198±0.00 5.280±0.00 N/A N/A N/A N/A N/A 1.222±0.17 9.311±4.98 18.814±3.79 N/A
ENSMUSG00000022433 ENSMUST00000117786 16.033±4.10 12.804±3.48 13.169±0.00 17.517±3.73 11.714±1.24 4.923±1.21 7.884±0.25 6.036±2.43 2.393±0.99 21.514±5.16 6.158±2.89 21.512±2.64 16.923±12.98 0.500±0.00
ENSMUST00000120859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.444±0.00 N/A N/A N/A
ENSMUST00000122044 5.928±1.19 4.262±0.43 3.796±0.00 9.955±1.20 3.890±0.00 N/A 2.613±0.48 1.676±0.20 0.889±0.40 8.076±0.72 3.800±0.77 5.508±1.16 10.300±0.00 0.335±0.00
ENSMUST00000127155 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136003 N/A N/A N/A 53.816±9.00 N/A N/A N/A N/A 3.064±1.47 N/A N/A 36.672±0.00 54.047±0.00 1.721±0.15
ENSMUST00000137028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144790 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145740 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088901 ENSMUST00000158276 52310.898±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 30790.100±0.00 N/A N/A N/A N/A

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