C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000403904 CSNK1E-002 ENSG00000213923 9606 - 22:38293250-38317439 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000403904
Transcript ID Adipose Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000403904 35.863±0.00 19.469±13.28 26.304±0.00 8.381±6.22 1.063±0.00 2.120±0.00 40.835±35.47 11.038±7.93 16.630±13.23 15.766±0.00 15.482±2.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008BX CIL_0008BX_0001 VISTA 22:37696030-38296592
CIL_0008KA CIL_0008KA_0001 VISTA 22:37698338-38299192
CIL_00082J CIL_00082J_0001 VISTA 22:37733233-38334508
CIL_0008C1 CIL_0008C1_0001 VISTA 22:37746133-38346872
CIL_00082K CIL_00082K_0001 VISTA 22:37750385-38350990
CIL_0008MM CIL_0008MM_0001 VISTA 22:37872841-38473542
CIL_0005DG CIL_0005DG_0001 CGP 22:38219291-38398522
CIL_0005DH CIL_0005DH_0001 CGP 22:38290691-38455199

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000278 TAS mitotic cell cycle
GO:0004672 ISS:IEA protein kinase activity
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 ISS nucleus
GO:0005829 TAS cytosol
GO:0006281 TAS DNA repair
GO:0006468 ISS:IEA protein phosphorylation
GO:0007165 TAS signal transduction
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0032436 ISS positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032922 ISS circadian regulation of gene expression
GO:0042752 ISS regulation of circadian rhythm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120859 Csnk1e-003 protein_coding Mus_musculus 0 1711
ENSMUST00000117786 Csnk1e-001 protein_coding Mus_musculus 0 1700
ENSMUST00000122044 Csnk1e-002 protein_coding Mus_musculus 0 1225
ENSMUST00000136003 Csnk1e-006 retained_intron Mus_musculus 0 974
ENSMUST00000137028 Csnk1e-008 retained_intron Mus_musculus 0 715
ENSMUST00000144790 Csnk1e-005 protein_coding Mus_musculus 0 571
ENSMUST00000127155 Csnk1e-010 retained_intron Mus_musculus 0 479
ENSMUST00000135519 Csnk1e-004 protein_coding Mus_musculus 0 472
ENSMUST00000156513 Csnk1e-007 retained_intron Mus_musculus 0 285
ENSMUST00000156043 Csnk1e-011 protein_coding Mus_musculus 0 226

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