C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: casein kinase 1, epsilon
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117786 Csnk1e-001 ENSMUSG00000022433 10090 - 15:79417856-79441999 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117786
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117786 16.033±4.10 12.804±3.48 13.169±0.00 17.517±3.73 11.714±1.24 4.923±1.21 7.884±0.25 6.036±2.43 2.393±0.99 21.514±5.16 6.158±2.89 21.512±2.64 16.923±12.98 0.500±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099H CIL_00099H_0002 VISTA 15:78863840-79464236
CIL_0008KJ CIL_0008KJ_0002 VISTA 15:78865517-79466323
CIL_0008BX CIL_0008BX_0002 VISTA 15:78873761-79474273
CIL_0008KA CIL_0008KA_0002 VISTA 15:78875821-79476550
CIL_00082J CIL_00082J_0002 VISTA 15:78908803-79509777
CIL_0008C1 CIL_0008C1_0002 VISTA 15:78918952-79520098
CIL_00082K CIL_00082K_0002 VISTA 15:78923635-79524085
CIL_0008MM CIL_0008MM_0002 VISTA 15:79023554-79624112
CIL_0005DG CIL_0005DG_0002 CGP 15:79360684-79443919
CIL_0005DH CIL_0005DH_0002 CGP 15:79417856-79505241

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IDA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005737 IEA cytoplasm
GO:0005829 TAS cytosol
GO:0006468 IDA protein phosphorylation
GO:0007623 TAS circadian rhythm
GO:0016055 IEA Wnt signaling pathway
GO:0030178 IGI negative regulation of Wnt signaling pathway
GO:0030529 IDA ribonucleoprotein complex
GO:0032436 IMP positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0032922 IMP circadian regulation of gene expression
GO:0034613 IDA cellular protein localization
GO:0042752 IMP regulation of circadian rhythm
GO:0044822 IEA poly(A) RNA binding
GO:0090263 IGI positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000025326 csnk1da-001 protein_coding Danio_rerio 0 726
ENST00000255641 CSNK1G2-001 protein_coding Homo_sapiens 0 204
ENST00000269361 CSNK1D-022 nonsense_mediated_decay Homo_sapiens 0 370
ENST00000314028 CSNK1D-001 protein_coding Homo_sapiens 0 872
ENST00000359867 CSNK1E-003 protein_coding Homo_sapiens 0 1757
ENST00000366216 CSNK1E-006 protein_coding Homo_sapiens 0 466
ENST00000392334 CSNK1D-002 protein_coding Homo_sapiens 0 872
ENST00000396832 CSNK1E-201 protein_coding Homo_sapiens 0 1757
ENST00000398519 CSNK1D-006 protein_coding Homo_sapiens 0 872
ENST00000400206 CSNK1E-001 protein_coding Homo_sapiens 0 1757
ENST00000403904 CSNK1E-002 protein_coding Homo_sapiens 0 1700
ENST00000405675 CSNK1E-005 protein_coding Homo_sapiens 0 1221
ENST00000413574 CSNK1E-004 protein_coding Homo_sapiens 0 1223
ENST00000430335 CSNK1E-008 protein_coding Homo_sapiens 0 942
ENST00000431611 CSNK1E-011 nonsense_mediated_decay Homo_sapiens 0 499
ENST00000431632 CSNK1E-016 protein_coding Homo_sapiens 0 564
ENST00000442216 CSNK1E-014 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000451964 CSNK1E-009 protein_coding Homo_sapiens 0 1000
ENST00000494610 CSNK1E-012 retained_intron Homo_sapiens 0 405
ENST00000495232 CSNK1E-013 retained_intron Homo_sapiens 0 396
ENST00000498529 CSNK1E-015 processed_transcript Homo_sapiens 0 455
ENST00000578904 CSNK1D-009 processed_transcript Homo_sapiens 0 680
ENST00000580446 CSNK1D-015 protein_coding Homo_sapiens 0 514
ENST00000581241 CSNK1D-007 retained_intron Homo_sapiens 0 556
ENST00000582844 CSNK1D-021 processed_transcript Homo_sapiens 0 813
ENST00000584377 CSNK1D-008 retained_intron Homo_sapiens 0 556
ENST00000585959 CSNK1G2-008 protein_coding Homo_sapiens 0 204
ENST00000589385 CSNK1G2-007 protein_coding Homo_sapiens 0 204
ENST00000590106 CSNK1G2-010 retained_intron Homo_sapiens 6e-40 169
ENST00000591002 CSNK1G2-009 protein_coding Homo_sapiens 4.00001e-40 169
ENST00000612795 CSNK1E-010 retained_intron Homo_sapiens 0 963

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