C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005DW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000213341-ENSG00000095485 CGP 9606 10:100188298-100267680
GeneTranscriptPositionBiotype
ENSG00000095485 (CWF19L1)
CWF19-like 1, cell cycle control (S. pombe) 		ENST00000354105 (CWF19L1-201) 100232298-100267680 protein_coding
ENST00000370379 (CWF19L1-007) 100233177-100246911 protein_coding
ENST00000466408 (CWF19L1-010) 100238183-100246116 processed_transcript
ENST00000466955 (CWF19L1-008) 100238158-100267631 processed_transcript
ENST00000468709 (CWF19L1-005) 100232298-100267680 processed_transcript
ENST00000473842 (CWF19L1-002) 100250274-100267667 processed_transcript
ENST00000478047 (CWF19L1-006) 100232305-100254619 processed_transcript
ENST00000482452 (CWF19L1-009) 100232299-100267598 processed_transcript
ENST00000496796 (CWF19L1-003) 100245800-100267623 processed_transcript
ENSG00000107566 (ERLIN1)
ER lipid raft associated 1 		ENST00000370408 (ERLIN1-003) 100154860-100186029 protein_coding
ENST00000407654 (ERLIN1-002) 100151808-100186033 protein_coding
ENST00000421367 (ERLIN1-001) 100150094-100188334 protein_coding
ENSG00000207362 (RNU6-422P)
RNA, U6 small nuclear 422, pseudogene 		ENST00000384632 (RNU6-422P-201) 100258571-100258677 snRNA
ENSG00000212464 (SNORA12)
small nucleolar RNA, H/ACA box 12 		ENST00000391162 (SNORA12-201) 100237156-100237302 snoRNA
ENSG00000213341 (CHUK)
conserved helix-loop-helix ubiquitous kinase 		ENST00000370397 (CHUK-001) 100188298-100229619 protein_coding
ENST00000585551 (CHUK-004) 100190671-100193423 processed_transcript
ENST00000588656 (CHUK-003) 100189192-100194079 processed_transcript
ENST00000590930 (CHUK-002) 100188367-100195942 processed_transcript
ENSG00000216004 (AL138921.1)
 ENST00000401185 (AL138921.1-201) 100228976-100229042 miRNA
ENSG00000230224 (PHBP9)
prohibitin pseudogene 9 		ENST00000453578 (PHBP9-001) 100248271-100249095 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0005DW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025199-ENSMUSG00000025200 CGP 10090 19:44073335-44135876
GeneTranscriptPositionBiotype
ENSMUSG00000025199 (Chuk)
conserved helix-loop-helix ubiquitous kinase 		ENSMUST00000026217 (Chuk-001) 44073335-44107480 protein_coding
ENSMUST00000119591 (Chuk-002) 44073336-44107477 protein_coding
ENSMUST00000123806 (Chuk-007) 44076938-44079035 retained_intron
ENSMUST00000134495 (Chuk-005) 44077245-44084450 retained_intron
ENSMUST00000144286 (Chuk-006) 44078290-44079282 retained_intron
ENSMUST00000146861 (Chuk-004) 44097197-44107282 retained_intron
ENSMUST00000147423 (Chuk-003) 44081415-44107469 retained_intron
ENSMUST00000149091 (Chuk-008) 44074373-44075904 retained_intron
ENSMUSG00000025200 (Cwf19l1)
CWF19-like 1, cell cycle control (S. pombe) 		ENSMUST00000026218 (Cwf19l1-201) 44108644-44135876 protein_coding
ENSMUSG00000077391 (Gm24336)
predicted gene, 24336 		ENSMUST00000104203 (Gm24336-201) 44113979-44114124 snoRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DW_0001ENSG00000095485ENST00000354105ENST00000370379ENST00000466408ENST00000466955ENST00000468709ENST00000473842ENST00000478047ENST00000482452ENST00000496796ENSG00000107566ENST00000370408ENST00000407654ENST00000421367ENSG00000207362ENST00000384632ENSG00000212464ENST00000391162ENSG00000213341ENST00000370397ENST00000585551ENST00000588656ENST00000590930ENSG00000216004ENST00000401185ENSG00000230224ENST00000453578CIL_0005DW_0002ENSMUSG00000025199ENSMUST00000026217ENSMUST00000119591ENSMUST00000123806ENSMUST00000134495ENSMUST00000144286ENSMUST00000146861ENSMUST00000147423ENSMUST00000149091ENSMUSG00000025200ENSMUST00000026218ENSMUSG00000077391ENSMUST00000104203
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005DW_0001ENSG00000095485ENST00000354105ENST00000370379ENST00000468709ENST00000478047ENST00000482452ENST00000496796ENSG00000107566ENST00000370408ENST00000407654ENST00000421367ENSG00000207362ENST00000384632ENSG00000212464ENST00000391162ENSG00000213341ENST00000370397ENSG00000216004ENST00000401185ENSG00000230224ENST00000453578CIL_0005DW_0002ENSMUSG00000025199ENSMUST00000026217ENSMUST00000119591ENSMUST00000144286ENSMUST00000147423ENSMUSG00000025200ENSMUST00000026218ENSMUSG00000077391ENSMUST00000104203
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000095485 ENST00000354105 1.726±0.00 5.640±0.00 N/A 4.174±0.00 1.662±0.00 N/A 1.172±0.92 2.309±0.00 N/A N/A 2.283±0.00 5.756±0.08 3.523±1.54 5.286±1.44
ENST00000370379 3.103±0.00 N/A N/A 2.295±1.23 2.981±0.00 N/A N/A 2.888±0.00 1.456±0.00 0.597±0.00 N/A N/A 4.009±0.00 5.470±0.59
ENST00000466408 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468709 N/A N/A N/A N/A N/A N/A 0.291±0.00 N/A N/A 0.975±0.00 1.033±0.00 N/A N/A N/A
ENST00000473842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478047 N/A 2.376±0.00 N/A 0.983±0.00 N/A 0.293±0.03 0.185±0.00 0.127±0.00 N/A N/A N/A N/A N/A N/A
ENST00000482452 N/A N/A N/A N/A N/A N/A N/A 0.571±0.00 N/A N/A 0.794±0.00 N/A N/A N/A
ENST00000496796 N/A N/A 0.890±0.00 N/A N/A 1.385±0.00 N/A N/A N/A N/A 0.388±0.00 N/A N/A N/A
ENSG00000107566 ENST00000370408 N/A N/A N/A N/A N/A N/A N/A 7.560±0.00 N/A N/A N/A 27.335±0.00 11.502±0.00 N/A
ENST00000407654 12.847±0.00 4.927±0.00 1.192±0.00 2.186±0.00 6.039±1.88 6.298±1.34 N/A 5.721±0.00 2.417±0.00 2.274±0.00 N/A 13.342±6.25 10.148±3.22 17.235±0.65
ENST00000421367 N/A N/A N/A 0.678±0.21 N/A N/A N/A N/A 9.785±0.00 2.540±0.00 0.491±0.00 6.178±3.36 6.687±0.22 4.607±0.00
ENSG00000207362 ENST00000384632 N/A 1.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000212464 ENST00000391162 1.064±0.00 2.352±0.00 26.445±0.00 14.723±14.36 24.850±24.74 41.956±41.55 45.283±0.00 42.616±0.00 33.921±0.00 36.989±0.00 94.088±0.00 40.146±52.59 1.545±0.00 0.842±0.00
ENSG00000213341 ENST00000370397 N/A 1.933±0.00 1.419±0.00 3.201±0.30 N/A 2.393±0.00 3.072±0.00 3.828±0.42 2.375±0.00 1.758±0.45 1.545±1.12 4.919±1.35 3.023±0.40 N/A
ENST00000585551 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000216004 ENST00000401185 N/A 0.576±0.00 N/A 1.203±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230224 ENST00000453578 0.576±0.00 N/A 0.925±0.00 0.795±0.34 0.590±0.08 0.354±0.33 0.159±0.14 0.237±0.17 0.528±0.41 1.342±0.25 N/A 0.773±0.24 0.125±0.06 0.611±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025199 ENSMUST00000026217 6.028±0.96 17.235±3.31 5.896±1.30 18.717±0.69 5.143±1.61 9.254±0.97 3.188±0.73 14.974±1.46 12.070±3.71 4.923±1.10 1.599±0.48 6.877±1.54 12.564±5.75 3.484±0.75
ENSMUST00000119591 N/A N/A 2.889±0.00 N/A 1.894±0.49 2.326±0.55 1.343±0.10 5.207±0.81 6.960±3.21 3.801±0.00 0.860±0.17 2.464±0.97 5.176±0.70 1.313±0.41
ENSMUST00000123806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144286 N/A N/A N/A 22.465±0.00 N/A N/A N/A N/A N/A N/A N/A 23.271±0.00 N/A N/A
ENSMUST00000146861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147423 N/A 23.241±4.22 N/A 4.975±1.94 4.707±0.00 3.884±1.01 N/A N/A N/A 2.806±0.00 N/A 5.097±1.98 N/A 1.875±0.00
ENSMUST00000149091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025200 ENSMUST00000026218 1.736±0.38 1.771±0.52 0.906±0.38 4.157±3.41 1.910±0.35 1.128±0.33 0.629±0.24 1.573±0.29 2.152±0.81 1.522±0.47 0.859±0.14 1.363±0.36 1.793±0.69 1.288±0.63
ENSMUSG00000077391 ENSMUST00000104203 N/A N/A 4.592±0.00 2.402±0.00 N/A N/A 502.749±4.50 1035.330±0.00 9.376±0.00 N/A 1.916±0.00 5.921±0.31 11.303±8.73 N/A

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