C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prohibitin pseudogene 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000453578 PHBP9-001 ENSG00000230224 9606 + 10:100248271-100249095 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000453578
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000453578 0.576±0.00 0.925±0.00 0.795±0.34 0.590±0.08 0.354±0.33 0.159±0.14 0.237±0.17 0.528±0.41 1.342±0.25 0.773±0.24 0.125±0.06 0.611±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QB CIL_0007QB_0001 VISTA 10:100185085-100786577
CIL_0005DW CIL_0005DW_0001 CGP 10:100188298-100267680
CIL_0005DX CIL_0005DX_0001 CGP 10:100232298-100286712

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125172 Phb-001 protein_coding Mus_musculus 0 791
ENSMUST00000146631 Gm7666-001 transcribed_processed_pseudogene Mus_musculus 0 784
ENSMUST00000117522 1700071K01Rik-001 processed_pseudogene Mus_musculus 0 726
ENSMUST00000117258 Gm7781-001 processed_pseudogene Mus_musculus 0 689
ENSMUST00000036374 Phb-002 protein_coding Mus_musculus 0 603
ENSMUST00000118371 Gm15078-001 processed_pseudogene Mus_musculus 0 433

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