C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005EB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000155906-ENSG00000146476 CGP 9606 6:151404763-151470101
GeneTranscriptPositionBiotype
ENSG00000146476 (C6orf211)
chromosome 6 open reading frame 211 		ENST00000367294 (C6orf211-001) 151452287-151470101 protein_coding
ENST00000483931 (C6orf211-003) 151452524-151464566 processed_transcript
ENST00000494826 (C6orf211-002) 151452486-151468542 nonsense_mediated_decay
ENST00000545879 (C6orf211-201) 151452258-151470097 protein_coding
ENSG00000155906 (RMND1)
required for meiotic nuclear division 1 homolog (S. cerevisiae) 		ENST00000336451 (RMND1-005) 151404854-151444625 protein_coding
ENST00000367303 (RMND1-001) 151404854-151452124 protein_coding
ENST00000444024 (RMND1-006) 151417336-151452119 protein_coding
ENST00000491268 (RMND1-002) 151436235-151445825 processed_transcript
ENST00000622845 (RMND1-201) 151404763-151452181 protein_coding
ENSG00000219395 (HSPA8P15)
heat shock 70kDa protein 8 pseudogene 15 		ENST00000401676 (HSPA8P15-001) 151411259-151413945 processed_pseudogene
CIL_0005EB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000019763-ENSMUSG00000061759 CGP 10090 10:4401915-4455141
GeneTranscriptPositionBiotype
ENSMUSG00000019763 (Rmnd1)
required for meiotic nuclear division 1 homolog (S. cerevisiae) 		ENSMUST00000042251 (Rmnd1-001) 4401915-4432388 protein_coding
ENSMUST00000126102 (Rmnd1-003) 4427445-4432334 protein_coding
ENSMUST00000128434 (Rmnd1-009) 4403546-4407918 protein_coding
ENSMUST00000131853 (Rmnd1-004) 4427523-4432334 protein_coding
ENSMUST00000137429 (Rmnd1-007) 4403984-4413745 retained_intron
ENSMUST00000140660 (Rmnd1-008) 4403171-4408105 retained_intron
ENSMUST00000148566 (Rmnd1-006) 4428536-4432301 retained_intron
ENSMUST00000155172 (Rmnd1-005) 4427243-4432295 protein_coding
ENSMUST00000156940 (Rmnd1-002) 4426094-4432344 retained_intron
ENSMUSG00000061759 (1700052N19Rik)
RIKEN cDNA 1700052N19 gene 		ENSMUST00000095893 (1700052N19Rik-001) 4432467-4455141 protein_coding
ENSMUST00000117489 (1700052N19Rik-003) 4432620-4439973 protein_coding
ENSMUST00000118544 (1700052N19Rik-002) 4432513-4455140 protein_coding
ENSMUST00000131636 (1700052N19Rik-005) 4434581-4440469 processed_transcript
ENSMUST00000134484 (1700052N19Rik-007) 4432635-4435174 retained_intron
ENSMUST00000143037 (1700052N19Rik-004) 4432627-4450412 processed_transcript
ENSMUST00000152294 (1700052N19Rik-006) 4432640-4453958 nonsense_mediated_decay
ENSMUSG00000085687 (Gm16153)
predicted gene 16153 		ENSMUST00000132184 (Gm16153-001) 4409033-4423369 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EB_0001ENSG00000146476ENST00000367294ENST00000483931ENST00000494826ENST00000545879ENSG00000155906ENST00000336451ENST00000367303ENST00000444024ENST00000491268ENST00000622845ENSG00000219395ENST00000401676CIL_0005EB_0002ENSMUSG00000019763ENSMUST00000042251ENSMUST00000126102ENSMUST00000128434ENSMUST00000131853ENSMUST00000137429ENSMUST00000140660ENSMUST00000148566ENSMUST00000155172ENSMUST00000156940ENSMUSG00000061759ENSMUST00000095893ENSMUST00000117489ENSMUST00000118544ENSMUST00000131636ENSMUST00000134484ENSMUST00000143037ENSMUST00000152294ENSMUSG00000085687ENSMUST00000132184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005EB_0001ENSG00000146476ENST00000367294ENST00000545879ENSG00000155906ENST00000336451ENST00000367303ENST00000444024ENST00000491268ENST00000622845ENSG00000219395ENST00000401676CIL_0005EB_0002ENSMUSG00000019763ENSMUST00000042251ENSMUST00000140660ENSMUST00000148566ENSMUST00000155172ENSMUST00000156940ENSMUSG00000061759ENSMUST00000095893ENSMUST00000117489ENSMUST00000118544ENSMUST00000143037ENSMUST00000152294ENSMUSG00000085687ENSMUST00000132184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000146476 ENST00000367294 2.107±0.00 0.823±0.00 2.129±0.00 7.798±0.00 5.053±1.03 4.137±0.18 4.057±0.56 5.835±0.98 5.391±0.32 3.626±2.31 1.213±0.16 10.013±4.59 6.710±3.18 5.188±0.99
ENST00000483931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494826 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000545879 1.819±0.00 2.644±0.00 N/A 3.230±0.00 N/A 1.646±0.00 N/A 10.009±0.00 1.935±0.00 1.793±0.00 1.222±0.00 N/A N/A 2.038±0.00
ENSG00000155906 ENST00000336451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.159±0.00 N/A N/A N/A
ENST00000367303 3.435±0.00 2.833±0.00 3.472±0.00 4.005±1.47 3.258±1.22 2.873±1.41 2.919±1.80 4.351±0.25 4.079±1.44 1.558±0.15 2.434±0.00 6.015±1.20 4.905±1.64 3.047±1.25
ENST00000444024 N/A N/A N/A 1.376±0.00 2.739±0.00 N/A N/A N/A N/A N/A 1.208±0.00 N/A N/A 2.017±0.00
ENST00000491268 N/A N/A 2.206±0.00 N/A 1.303±0.00 1.603±0.00 N/A N/A N/A N/A 0.325±0.00 N/A N/A N/A
ENST00000622845 2.218±0.00 0.726±0.00 N/A N/A 1.618±0.00 1.318±0.00 N/A 2.291±0.00 1.586±0.00 0.645±0.00 N/A 1.689±0.29 1.140±0.18 1.291±0.44
ENSG00000219395 ENST00000401676 0.184±0.00 0.832±0.00 N/A 0.089±0.00 0.052±0.00 0.273±0.00 0.098±0.01 0.613±0.27 0.058±0.00 0.119±0.04 0.082±0.00 0.355±0.15 0.060±0.01 0.184±0.15
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000019763 ENSMUST00000042251 5.493±1.60 8.128±1.62 2.640±0.77 5.873±2.44 4.942±1.61 4.646±1.60 6.673±0.95 8.602±2.62 5.789±2.25 3.632±0.85 1.305±0.11 5.990±2.20 3.584±1.32 6.357±0.96
ENSMUST00000126102 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128434 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131853 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140660 14.700±1.52 N/A 15.038±2.97 4.408±0.00 13.962±2.88 9.871±0.28 11.221±1.28 23.511±2.26 13.762±3.25 4.546±0.67 N/A 15.832±1.94 7.672±2.78 36.019±3.89
ENSMUST00000148566 N/A 14.025±0.50 N/A N/A 13.374±1.49 8.348±0.00 15.520±6.34 N/A N/A 4.238±0.00 N/A 14.633±0.00 N/A N/A
ENSMUST00000155172 8.418±0.00 17.931±1.79 N/A N/A 10.181±0.00 N/A 6.681±0.00 N/A N/A N/A N/A N/A 6.497±0.26 N/A
ENSMUST00000156940 4.387±0.06 26.788±5.24 N/A N/A 6.964±0.53 6.889±2.19 N/A 9.904±1.00 12.060±1.08 2.902±1.35 N/A 7.097±1.23 N/A N/A
ENSMUSG00000061759 ENSMUST00000095893 3.032±0.65 1.721±0.00 4.725±0.50 3.970±0.79 3.054±2.13 2.046±1.38 1.706±0.56 1.965±0.62 6.684±3.03 2.070±0.89 5.831±0.50 2.711±0.87 4.396±1.44 27.505±14.22
ENSMUST00000117489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.102±2.04 17.555±0.00
ENSMUST00000118544 0.615±0.21 0.906±0.24 0.980±0.35 0.700±0.17 1.181±0.32 1.132±0.08 0.276±0.05 0.555±0.08 0.990±0.42 0.638±0.14 0.687±0.06 1.452±0.45 0.719±0.07 N/A
ENSMUST00000131636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143037 N/A N/A N/A N/A 1.490±0.00 N/A 0.392±0.04 N/A N/A 0.724±0.00 N/A 1.180±0.14 N/A N/A
ENSMUST00000152294 N/A N/A N/A 11.972±0.00 N/A N/A N/A N/A N/A N/A N/A 10.429±0.00 12.685±5.12 45.624±0.00
ENSMUSG00000085687 ENSMUST00000132184 N/A N/A 1.553±0.00 0.420±0.00 N/A N/A N/A N/A 1.346±0.17 0.698±0.16 N/A 1.240±0.29 0.599±0.00 N/A

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