C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700052N19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118544 1700052N19Rik-002 ENSMUSG00000061759 10090 + 10:4432513-4455140 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000118544
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000118544 0.615±0.21 0.906±0.24 0.980±0.35 0.700±0.17 1.181±0.32 1.132±0.08 0.276±0.05 0.555±0.08 0.990±0.42 0.638±0.14 0.687±0.06 1.452±0.45 0.719±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EB CIL_0005EB_0002 CGP 10:4401915-4455141
CIL_0005EC CIL_0005EC_0002 CGP 10:4432467-4562231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367294 C6orf211-001 protein_coding Homo_sapiens 0 542
ENST00000483931 C6orf211-003 processed_transcript Homo_sapiens 0 412
ENST00000494826 C6orf211-002 nonsense_mediated_decay Homo_sapiens 4e-35 152
ENST00000545879 C6orf211-201 protein_coding Homo_sapiens 0 542

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