C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700052N19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000095893 1700052N19Rik-001 ENSMUSG00000061759 10090 + 10:4432467-4455141 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000095893
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000095893 3.032±0.65 1.721±0.00 4.725±0.50 3.970±0.79 3.054±2.13 2.046±1.38 1.706±0.56 1.965±0.62 6.684±3.03 2.070±0.89 5.831±0.50 2.711±0.87 4.396±1.44 27.505±14.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EB CIL_0005EB_0002 CGP 10:4401915-4455141
CIL_0005EC CIL_0005EC_0002 CGP 10:4432467-4562231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367294 C6orf211-001 protein_coding Homo_sapiens 0 961
ENST00000483931 C6orf211-003 processed_transcript Homo_sapiens 0 412
ENST00000494826 C6orf211-002 nonsense_mediated_decay Homo_sapiens 0 405
ENST00000545879 C6orf211-201 protein_coding Homo_sapiens 0 797

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