C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: RIKEN cDNA 1700052N19 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152294 1700052N19Rik-006 ENSMUSG00000061759 10090 + 10:4432640-4453958 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000152294
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000152294 11.972±0.00 10.429±0.00 12.685±5.12 45.624±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EB CIL_0005EB_0002 CGP 10:4401915-4455141
CIL_0005EC CIL_0005EC_0002 CGP 10:4432467-4562231

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000367294 C6orf211-001 protein_coding Homo_sapiens 0 313
ENST00000483931 C6orf211-003 processed_transcript Homo_sapiens 2e-34 150
ENST00000494826 C6orf211-002 nonsense_mediated_decay Homo_sapiens 4.2039e-45 185
ENST00000545879 C6orf211-201 protein_coding Homo_sapiens 0 313

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