C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005FQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204183-ENSG00000125965 CGP 9606 20:35433029-35454746
GeneTranscriptPositionBiotype
ENSG00000125965 (GDF5)
growth differentiation factor 5 		ENST00000374369 (GDF5-002) 35433347-35438243 protein_coding
ENST00000374372 (GDF5-001) 35433347-35454746 protein_coding
ENSG00000204183 (GDF5OS)
growth differentiation factor 5 opposite strand 		ENST00000374375 (GDF5OS-001) 35433029-35435450 protein_coding
ENSG00000221763 (MIR1289-1)
microRNA 1289-1 		ENST00000408836 (MIR1289-1-201) 35453954-35454097 miRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005FQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000078972-ENSMUSG00000038259 CGP 10090 2:155940728-155945367
GeneTranscriptPositionBiotype
ENSMUSG00000038259 (Gdf5)
growth differentiation factor 5 		ENSMUST00000040162 (Gdf5-001) 155941023-155945367 protein_coding
ENSMUSG00000078972 (Gm15557)
predicted gene 15557 		ENSMUST00000109629 (Gm15557-001) 155940728-155942750 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FQ_0001ENSG00000125965ENST00000374369ENST00000374372ENSG00000204183ENST00000374375ENSG00000221763ENST00000408836CIL_0005FQ_0002ENSMUSG00000038259ENSMUST00000040162ENSMUSG00000078972ENSMUST00000109629
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005FQ_0001ENSG00000125965ENST00000374369ENST00000374372ENSG00000204183ENST00000374375ENSG00000221763ENST00000408836CIL_0005FQ_0002ENSMUSG00000038259ENSMUST00000040162ENSMUSG00000078972ENSMUST00000109629
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000125965 ENST00000374369 N/A N/A N/A N/A 0.932±0.71 N/A 0.029±0.00 N/A N/A 2.374±2.25 0.018±0.00 0.186±0.00 N/A 0.827±0.00
ENST00000374372 0.276±0.00 0.269±0.00 N/A 0.321±0.00 0.273±0.00 0.173±0.00 0.035±0.00 0.030±0.00 0.026±0.00 N/A N/A 0.037±0.01 0.024±0.00 0.200±0.00
ENSG00000204183 ENST00000374375 0.163±0.00 0.396±0.00 N/A 0.185±0.00 N/A 0.084±0.00 0.058±0.00 0.117±0.00 0.090±0.00 N/A 0.011±0.00 N/A N/A 0.196±0.00
ENSG00000221763 ENST00000408836 N/A 0.143±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.560±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038259 ENSMUST00000040162 1.405±0.41 0.196±0.04 0.734±0.12 0.407±0.16 0.388±0.11 0.112±0.04 0.063±0.01 0.152±0.04 0.025±0.03 0.231±0.04 0.064±0.02 0.389±0.16 0.122±0.10 0.212±0.05
ENSMUSG00000078972 ENSMUST00000109629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.027±0.00 N/A N/A

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