C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005GP_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000026489-ENSDARG00000005690 CGP 7955 1:55499599-55537156
GeneTranscriptPositionBiotype
ENSDARG00000005690 (si:ch211-196h16.11)
solute carrier family 25, member 41 		ENSDART00000074058 (si:ch211-196h16.11-201) 55517970-55536713 protein_coding
ENSDART00000152666 (si:ch211-196h16.11-001) 55513601-55537156 protein_coding
ENSDARG00000026489 (khsrp)
KH-type splicing regulatory protein 		ENSDART00000038330 (khsrp-001) 55499599-55511646 protein_coding
ENSDART00000140016 (khsrp-003) 55506802-55511378 protein_coding
ENSDART00000150548 (khsrp-004) 55505845-55511580 protein_coding
CIL_0005GP_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000088247-ENSG00000181240 CGP 9606 19:6413348-6433779
GeneTranscriptPositionBiotype
ENSG00000088247 (KHSRP)
KH-type splicing regulatory protein 		ENST00000398148 (KHSRP-001) 6413348-6424794 protein_coding
ENST00000594496 (KHSRP-008) 6414457-6415684 protein_coding
ENST00000594745 (KHSRP-012) 6413411-6415695 protein_coding
ENST00000595112 (KHSRP-007) 6417739-6421698 retained_intron
ENST00000595223 (KHSRP-005) 6413965-6416812 protein_coding
ENST00000595258 (KHSRP-004) 6418701-6424277 protein_coding
ENST00000595548 (KHSRP-003) 6418020-6424327 protein_coding
ENST00000597656 (KHSRP-011) 6413641-6415448 protein_coding
ENST00000597704 (KHSRP-006) 6421001-6422357 retained_intron
ENST00000599395 (KHSRP-002) 6417739-6424529 protein_coding
ENST00000599642 (KHSRP-010) 6415216-6415721 retained_intron
ENST00000600480 (KHSRP-009) 6414703-6415707 protein_coding
ENST00000619396 (KHSRP-201) 6413430-6424775 protein_coding
ENSG00000181240 (SLC25A41)
solute carrier family 25, member 41 		ENST00000321510 (SLC25A41-003) 6426039-6433762 protein_coding
ENST00000458275 (SLC25A41-002) 6426039-6433762 nonsense_mediated_decay
ENST00000597558 (SLC25A41-001) 6426037-6433779 nonsense_mediated_decay
CIL_0005GP_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000007670-ENSMUSG00000011486 CGP 10090 17:57021058-57041654
GeneTranscriptPositionBiotype
ENSMUSG00000007670 (Khsrp)
KH-type splicing regulatory protein 		ENSMUST00000007814 (Khsrp-201) 57021058-57031507 protein_coding
ENSMUSG00000011486 (Slc25a41)
solute carrier family 25, member 41 		ENSMUST00000058661 (Slc25a41-001) 57032773-57041654 protein_coding
ENSMUST00000169012 (Slc25a41-002) 57032925-57041647 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GP_0001ENSDARG00000005690ENSDART00000074058ENSDART00000152666ENSDARG00000026489ENSDART00000038330ENSDART00000140016ENSDART00000150548CIL_0005GP_0002ENSG00000088247ENST00000398148ENST00000594496ENST00000594745ENST00000595112ENST00000595223ENST00000595258ENST00000595548ENST00000597656ENST00000597704ENST00000599395ENST00000599642ENST00000600480ENST00000619396ENSG00000181240ENST00000321510ENST00000458275ENST00000597558CIL_0005GP_0003ENSMUSG00000007670ENSMUST00000007814ENSMUSG00000011486ENSMUST00000058661ENSMUST00000169012
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GP_0001ENSDARG00000005690ENSDART00000074058ENSDART00000152666ENSDARG00000026489ENSDART00000038330CIL_0005GP_0002ENSG00000088247ENST00000398148ENST00000594496ENST00000595112ENST00000599395ENST00000619396ENSG00000181240ENST00000321510ENST00000458275ENST00000597558CIL_0005GP_0003ENSMUSG00000007670ENSMUST00000007814ENSMUSG00000011486ENSMUST00000058661ENSMUST00000169012
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000005690 ENSDART00000074058 N/A N/A N/A N/A N/A N/A N/A N/A 0.272±0.00 N/A 5.708±0.00 N/A N/A N/A
ENSDART00000152666 N/A N/A N/A 14.346±6.68 N/A N/A 2.553±0.47 1.600±0.13 N/A N/A 3.793±0.00 N/A N/A N/A
ENSDARG00000026489 ENSDART00000038330 N/A N/A N/A 5.650±3.60 N/A N/A 10.170±7.33 7.730±4.32 5.302±0.00 N/A 4.147±0.00 N/A N/A N/A
ENSDART00000140016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000150548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000088247 ENST00000398148 14.614±0.00 N/A 0.691±0.00 2.421±0.00 6.577±0.00 7.269±3.30 0.893±0.00 4.455±3.28 N/A N/A N/A 3.813±0.00 N/A 20.050±1.66
ENST00000594496 N/A 35.244±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.113±0.00 N/A N/A N/A
ENST00000594745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595112 N/A N/A 5.300±0.00 3.161±0.00 12.201±0.00 11.664±0.00 1.884±0.00 8.423±0.00 10.450±0.00 9.076±0.00 N/A 30.162±13.65 48.869±0.00 104.411±0.00
ENST00000595223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595258 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000595548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599395 N/A N/A N/A N/A N/A N/A 1.463±0.00 N/A 4.205±0.00 2.629±0.00 4.148±0.00 37.849±0.00 49.722±0.00 48.030±0.00
ENST00000599642 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600480 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619396 N/A 24.961±0.00 N/A N/A N/A N/A 13.484±0.00 N/A 9.649±0.00 25.191±0.00 16.623±15.73 44.807±24.73 26.543±11.17 N/A
ENSG00000181240 ENST00000321510 N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458275 0.173±0.00 N/A N/A 0.719±0.00 0.140±0.00 0.563±0.00 N/A 0.506±0.00 N/A N/A N/A 0.181±0.00 N/A 0.321±0.00
ENST00000597558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 0.130±0.08 2.013±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007670 ENSMUST00000007814 19.047±6.82 46.867±5.46 23.176±0.72 24.470±12.25 22.669±7.70 25.180±3.44 7.579±2.40 14.382±2.86 16.002±7.30 16.701±2.62 4.735±0.84 33.939±12.48 15.079±5.96 16.111±7.26
ENSMUSG00000011486 ENSMUST00000058661 0.189±0.02 N/A N/A 0.038±0.01 N/A N/A N/A 0.083±0.01 N/A 0.061±0.00 N/A N/A N/A 10.400±4.49
ENSMUST00000169012 0.049±0.00 0.097±0.04 0.030±0.00 0.112±0.07 0.038±0.01 0.085±0.00 0.045±0.03 0.078±0.00 0.012±0.00 0.126±0.00 0.099±0.04 0.161±0.11 N/A 6.496±1.90

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