C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KH-type splicing regulatory protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619396 KHSRP-201 ENSG00000088247 9606 - 19:6413430-6424775 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartLiverLungMuscleOvaryPlacentaENST00000619396
Transcript ID Adrenal Heart Liver Lung Muscle Ovary Placenta
ENST00000619396 24.961±0.00 13.484±0.00 9.649±0.00 25.191±0.00 16.623±15.73 44.807±24.73 26.543±11.17

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WB CIL_0003WB_0001 CGP 19:6379569-6424794
CIL_0005GP CIL_0005GP_0002 CGP 19:6413348-6433779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005634 IDA nucleus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000007814 Khsrp-201 protein_coding Mus_musculus 0 2386
ENSMUST00000184045 Gm8602-001 processed_pseudogene Mus_musculus 0 496

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