C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005GR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004094-ENSDARG00000043185 CGP 7955 8:20695816-20768820
GeneTranscriptPositionBiotype
ENSDARG00000043185 (mllt1)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 		ENSDART00000063400 (mllt1-001) 20732173-20768820 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0005GR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130377-ENSG00000130382 CGP 9606 19:6135247-6279948
GeneTranscriptPositionBiotype
ENSG00000087903 (RFX2)
regulatory factor X, 2 (influences HLA class II expression) 		ENST00000303657 (RFX2-002) 5993164-6110534 protein_coding
ENST00000359161 (RFX2-004) 5993517-6049232 protein_coding
ENST00000585324 (RFX2-025) 6176275-6199524 processed_transcript
ENST00000586302 (RFX2-012) 6026163-6110446 protein_coding
ENST00000586806 (RFX2-013) 6010182-6110482 protein_coding
ENST00000586940 (RFX2-015) 6027164-6110478 processed_transcript
ENST00000587181 (RFX2-010) 6040203-6110476 protein_coding
ENST00000587321 (RFX2-014) 6013039-6110480 protein_coding
ENST00000587700 (RFX2-024) 6189728-6199529 processed_transcript
ENST00000588021 (RFX2-016) 6007866-6026699 retained_intron
ENST00000589340 (RFX2-019) 6002722-6008226 protein_coding
ENST00000589523 (RFX2-026) 6191326-6199507 processed_transcript
ENST00000589641 (RFX2-022) 6191570-6199572 processed_transcript
ENST00000589712 (RFX2-023) 6175873-6199563 processed_transcript
ENST00000589742 (RFX2-018) 6007775-6110512 protein_coding
ENST00000590778 (RFX2-020) 5994816-5997373 retained_intron
ENST00000590822 (RFX2-009) 6078101-6110468 processed_transcript
ENST00000592172 (RFX2-007) 6026196-6110473 processed_transcript
ENST00000592281 (RFX2-011) 6040186-6057283 protein_coding
ENST00000592337 (RFX2-017) 6008189-6023205 processed_transcript
ENST00000592473 (RFX2-005) 6040035-6113761 protein_coding
ENST00000592546 (RFX2-003) 5994502-6110532 protein_coding
ENST00000592883 (RFX2-021) 6040074-6199529 protein_coding
ENST00000593241 (RFX2-006) 6040086-6110601 protein_coding
ENSG00000130382 (MLLT1)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 		ENST00000252674 (MLLT1-001) 6210379-6279948 protein_coding
ENST00000585588 (MLLT1-002) 6213120-6216968 processed_transcript
ENST00000587473 (MLLT1-003) 6210689-6211476 processed_transcript
ENSG00000267563 (CTC-503J8.4)
 ENST00000588192 (CTC-503J8.4-001) 6259157-6259799 antisense
ENSG00000280394 (CTC-503J8.8)
 ENST00000623576 (CTC-503J8.8-001) 6263068-6263469 TEC

Homo sapiens Ensembl (GRCh38)

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CIL_0005GR_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024209-ENSMUSG00000024212 CGP 10090 17:56875477-56935388
GeneTranscriptPositionBiotype
ENSMUSG00000024209 (1700061G19Rik)
RIKEN cDNA 1700061G19 gene 		ENSMUST00000025048 (1700061G19Rik-001) 56875477-56888904 protein_coding
ENSMUST00000125425 (1700061G19Rik-002) 56875503-56877818 retained_intron
ENSMUSG00000024212 (Mllt1)
myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 1 		ENSMUST00000025053 (Mllt1-201) 56892612-56935388 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GR_0001ENSDARG00000043185ENSDART00000063400CIL_0005GR_0002ENSG00000087903ENST00000303657ENST00000359161ENST00000585324ENST00000586302ENST00000586806ENST00000586940ENST00000587181ENST00000587321ENST00000587700ENST00000588021ENST00000589340ENST00000589523ENST00000589641ENST00000589712ENST00000589742ENST00000590778ENST00000590822ENST00000592172ENST00000592281ENST00000592337ENST00000592473ENST00000592546ENST00000592883ENST00000593241ENSG00000130382ENST00000252674ENST00000585588ENST00000587473ENSG00000267563ENST00000588192ENSG00000280394ENST00000623576CIL_0005GR_0003ENSMUSG00000024209ENSMUST00000025048ENSMUST00000125425ENSMUSG00000024212ENSMUST00000025053
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005GR_0001ENSDARG00000043185ENSDART00000063400CIL_0005GR_0002ENSG00000087903ENST00000303657ENST00000359161ENST00000586940ENST00000587181ENST00000587700ENST00000588021ENST00000592281ENST00000592337ENST00000592546ENST00000592883ENSG00000130382ENST00000252674ENSG00000267563ENST00000588192ENSG00000280394ENST00000623576CIL_0005GR_0003ENSMUSG00000024209ENSMUST00000025048ENSMUSG00000024212ENSMUST00000025053
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000043185 ENSDART00000063400 N/A N/A N/A 2.032±0.41 N/A N/A 1.219±0.24 2.702±0.54 0.232±0.00 N/A 0.684±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000087903 ENST00000303657 N/A N/A N/A N/A N/A N/A N/A 0.293±0.00 0.358±0.00 1.348±0.00 N/A 5.290±0.00 N/A 62.011±41.93
ENST00000359161 1.000±0.00 0.665±0.00 0.145±0.00 0.820±0.48 1.764±0.00 N/A 0.299±0.00 N/A 0.462±0.00 4.231±0.00 0.141±0.09 1.874±1.27 0.505±0.00 21.353±0.00
ENST00000585324 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586940 N/A N/A N/A N/A N/A 1.255±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587181 N/A N/A N/A 0.913±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587700 N/A 0.513±0.00 0.127±0.00 N/A 0.236±0.00 0.137±0.00 0.143±0.00 0.149±0.12 0.032±0.00 N/A N/A 0.281±0.00 0.243±0.04 N/A
ENST00000588021 N/A N/A N/A N/A N/A 0.585±0.00 0.218±0.00 0.155±0.00 N/A N/A N/A N/A N/A N/A
ENST00000589340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589523 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589712 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590822 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592281 N/A N/A N/A N/A N/A N/A N/A N/A 6.574±0.00 N/A N/A N/A N/A N/A
ENST00000592337 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.018±0.00 N/A N/A
ENST00000592473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592546 0.744±0.00 N/A N/A N/A N/A N/A N/A 0.117±0.00 N/A 0.340±0.00 N/A 0.415±0.00 0.534±0.10 N/A
ENST00000592883 N/A N/A N/A 1.366±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593241 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000130382 ENST00000252674 22.097±0.00 15.309±0.00 0.373±0.00 17.601±0.00 8.914±8.82 25.199±0.00 7.178±6.92 7.047±6.53 3.783±3.15 23.834±0.00 31.602±0.00 28.038±33.84 16.198±1.47 17.990±2.18
ENST00000585588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267563 ENST00000588192 N/A N/A N/A N/A 0.050±0.00 N/A 0.085±0.00 N/A N/A 0.779±0.00 N/A 0.207±0.00 N/A N/A
ENSG00000280394 ENST00000623576 0.211±0.00 0.261±0.00 N/A 0.312±0.00 0.436±0.00 0.195±0.00 0.356±0.00 N/A N/A 0.284±0.00 N/A N/A N/A 0.354±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024209 ENSMUST00000025048 0.096±0.04 0.083±0.01 1.518±0.14 0.202±0.19 N/A N/A N/A 0.036±0.01 0.028±0.01 N/A 0.033±0.01 0.215±0.09 0.069±0.03 62.545±24.53
ENSMUST00000125425 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000024212 ENSMUST00000025053 17.661±7.64 17.696±4.32 17.871±0.71 30.781±16.81 20.550±6.68 24.816±7.00 9.062±1.19 11.992±3.26 8.665±2.88 23.767±1.58 8.791±0.79 32.490±11.39 11.286±6.50 19.219±6.39

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