Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	tubulin, gamma 2
ENSMUST00000043654	Tubg2-001	ENSMUSG00000045007	10090	+	11:101155907-101161787	protein_coding

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000043654	0.760±0.40	1.765±0.12	1.794±0.80	15.161±8.20	0.656±0.43	1.341±0.20	0.506±0.10	0.431±0.14	0.098±0.04	0.786±0.28	0.875±0.18	2.708±0.71	0.607±0.50	0.437±0.15

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00068T	CIL_00068T_0002	CGP	11:101119938-101161787
CIL_0005H5	CIL_0005H5_0002	CGP	11:101155907-101171351

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000242	IDA	pericentriolar material
GO:0000930	IEA	gamma-tubulin complex
GO:0003924	IEA	GTPase activity
GO:0005525	IEA	GTP binding
GO:0005813	IDA	centrosome
GO:0005874	IEA	microtubule
GO:0005876	IDA	spindle microtubule
GO:0005881	IDA	cytoplasmic microtubule
GO:0006184	IEA	GTP catabolic process
GO:0007020	IEA	microtubule nucleation
GO:0031122	IEA	cytoplasmic microtubule organization

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000026701	tubg1-001	protein_coding	Danio_rerio	0	1282
ENST00000251412	TUBG2-001	protein_coding	Homo_sapiens	0	2013
ENST00000251413	TUBG1-001	protein_coding	Homo_sapiens	0	1873
ENST00000418303	TUBG1P-001	processed_pseudogene	Homo_sapiens	0	1504
ENST00000588056	TUBG1-003	retained_intron	Homo_sapiens	0	551
ENST00000588870	TUBG2-002	retained_intron	Homo_sapiens	0	1219
ENST00000589688	TUBG1-005	nonsense_mediated_decay	Homo_sapiens	0	1225
ENST00000590396	TUBG2-003	retained_intron	Homo_sapiens	4e-21	106
ENST00000591509	TUBG1-004	protein_coding	Homo_sapiens	0	595

Loading