C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, gamma 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000251412 TUBG2-001 ENSG00000037042 9606 + 17:42659305-42667006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000251412
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000251412 7.583±0.00 6.485±0.00 32.726±18.50 9.033±7.78 9.166±0.00 2.333±1.70 6.363±6.15 2.078±0.16 4.251±2.97 2.013±0.00 9.077±1.41 6.615±0.74 8.769±2.30

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00068T CIL_00068T_0001 CGP 17:42609676-42667006
CIL_0005H5 CIL_0005H5_0001 CGP 17:42659305-42676994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000086 TAS G2/M transition of mitotic cell cycle
GO:0000242 IEA pericentriolar material
GO:0000278 TAS mitotic cell cycle
GO:0000930 IEA gamma-tubulin complex
GO:0003924 IEA GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005525 IEA GTP binding
GO:0005813 IEA centrosome
GO:0005829 TAS cytosol
GO:0005874 IDA microtubule
GO:0005876 IEA spindle microtubule
GO:0005881 IEA cytoplasmic microtubule
GO:0006184 IEA GTP catabolic process
GO:0007020 IEA microtubule nucleation
GO:0015630 TAS microtubule cytoskeleton
GO:0031122 IEA cytoplasmic microtubule organization
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000043654 Tubg2-001 protein_coding Mus_musculus 0 2013
ENSMUST00000043680 Tubg1-001 protein_coding Mus_musculus 0 1803
ENSDART00000026701 tubg1-001 protein_coding Danio_rerio 0 1221
ENSMUST00000137844 Tubg1-002 processed_transcript Mus_musculus 0 579

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