C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005IF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134371-ENSG00000134371 CGP 9606 1:193122017-193253901
GeneTranscriptPositionBiotype
ENSG00000134371 (CDC73)
cell division cycle 73 		ENST00000367435 (CDC73-001) 193122017-193253901 protein_coding
ENST00000477868 (CDC73-003) 193233026-193251168 processed_transcript
ENST00000482484 (CDC73-002) 193122470-193138173 processed_transcript
ENSG00000162630 (B3GALT2)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 		ENST00000367434 (B3GALT2-001) 193179045-193186654 protein_coding
ENSG00000276735 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000620543 (Metazoa_SRP.1-386) 193236794-193237107 misc_RNA

Homo sapiens Ensembl (GRCh38)

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CIL_0005IF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026361-ENSMUSG00000026361 CGP 10090 1:143598800-143702893
GeneTranscriptPositionBiotype
ENSMUSG00000026361 (Cdc73)
cell division cycle 73, Paf1/RNA polymerase II complex component 		ENSMUST00000018337 (Cdc73-001) 143598800-143702893 protein_coding
ENSMUST00000159794 (Cdc73-003) 143691315-143702200 nonsense_mediated_decay
ENSMUST00000162638 (Cdc73-002) 143606161-143640581 processed_transcript
ENSMUST00000188838 (Cdc73-005) 143633851-143636577 retained_intron
ENSMUST00000189597 (Cdc73-004) 143639470-143642525 retained_intron
ENSMUSG00000033849 (B3galt2)
UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 		ENSMUST00000038252 (B3galt2-001) 143640664-143654614 protein_coding
ENSMUSG00000089640 (Gm6397)
predicted gene 6397 		ENSMUST00000161973 (Gm6397-001) 143683230-143684298 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IF_0001ENSG00000134371ENST00000367435ENST00000477868ENST00000482484ENSG00000162630ENST00000367434ENSG00000276735ENST00000620543CIL_0005IF_0002ENSMUSG00000026361ENSMUST00000018337ENSMUST00000159794ENSMUST00000162638ENSMUST00000188838ENSMUST00000189597ENSMUSG00000033849ENSMUST00000038252ENSMUSG00000089640ENSMUST00000161973
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005IF_0001ENSG00000134371ENST00000367435ENST00000477868ENSG00000162630ENST00000367434ENSG00000276735ENST00000620543CIL_0005IF_0002ENSMUSG00000026361ENSMUST00000018337ENSMUST00000162638ENSMUSG00000033849ENSMUST00000038252ENSMUSG00000089640ENSMUST00000161973
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000134371 ENST00000367435 4.061±0.00 2.798±0.00 3.374±0.00 3.577±0.04 4.205±1.17 4.120±1.61 4.367±1.71 3.475±0.84 5.620±4.64 5.494±1.10 1.180±0.02 3.842±0.39 2.675±0.69 3.518±1.37
ENST00000477868 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.830±0.00 4.402±0.00 6.948±0.00
ENST00000482484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000162630 ENST00000367434 0.038±0.00 0.421±0.00 0.269±0.00 9.626±4.83 0.071±0.00 0.423±0.03 6.366±1.74 0.437±0.21 0.495±0.43 1.513±1.39 0.127±0.00 0.506±0.28 0.204±0.12 0.906±0.60
ENSG00000276735 ENST00000620543 0.169±0.00 1.066±0.00 N/A N/A 0.658±0.00 0.305±0.00 0.156±0.00 0.690±0.00 0.961±0.00 0.143±0.00 0.049±0.00 0.234±0.00 0.290±0.00 0.279±0.14
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026361 ENSMUST00000018337 1.530±0.18 1.489±0.34 3.320±0.06 2.312±0.16 1.043±0.15 0.981±0.18 1.443±0.14 1.232±0.19 1.229±0.59 1.727±0.38 2.487±0.25 1.648±1.05 4.154±0.85 1.881±0.43
ENSMUST00000159794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000162638 N/A N/A 2.603±0.00 2.127±0.00 N/A 0.736±0.00 N/A N/A 1.707±0.96 N/A N/A 2.439±1.46 7.504±2.80 1.866±0.09
ENSMUST00000188838 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189597 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000033849 ENSMUST00000038252 8.729±2.87 1.827±1.28 N/A 1.947±1.09 6.065±0.51 0.526±0.16 0.793±0.05 0.491±0.03 N/A 0.502±0.08 0.408±0.03 0.802±0.39 N/A N/A
ENSMUSG00000089640 ENSMUST00000161973 0.186±0.13 0.466±0.03 1.452±0.14 1.491±1.05 0.367±0.11 0.130±0.00 0.118±0.09 0.331±0.14 1.146±2.03 0.243±0.15 0.034±0.00 0.263±0.13 0.307±0.28 0.328±0.16

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