C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6397
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000161973 Gm6397-001 ENSMUSG00000089640 10090 + 1:143683230-143684298 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000161973
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000161973 0.186±0.13 0.466±0.03 1.452±0.14 1.491±1.05 0.367±0.11 0.130±0.00 0.118±0.09 0.331±0.14 1.146±2.03 0.243±0.15 0.034±0.00 0.263±0.13 0.307±0.28 0.328±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IF CIL_0005IF_0002 CGP 1:143598800-143702893

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 1629
ENST00000397093 RP3-522P13.2-001 processed_pseudogene Homo_sapiens 0 261
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1493
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 1633
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1471
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1072
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 987
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 965
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 230
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1629
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1402
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1011
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 712
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 436
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1212
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 974
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 191
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 4e-24 113
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1253
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1471
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1002
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 761
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 713
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 9e-23 108

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