C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: dynactin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000030158 Dctn3-001 ENSMUSG00000028447 10090 - 4:41714798-41723170 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000030158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000030158 25.284±12.91 36.349±2.46 38.081±9.57 85.132±49.76 21.805±6.81 34.952±2.95 20.770±4.21 36.860±6.00 26.198±3.57 22.368±2.26 16.204±1.45 29.113±4.25 29.863±10.00 35.658±14.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005IL CIL_0005IL_0002 CGP 4:41712033-41723170
CIL_0003GW CIL_0003GW_0002 CGP 4:41714798-41731142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000776 IEA kinetochore
GO:0000910 ISS cytokinesis
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005813 IEA centrosome
GO:0005869 ISS dynactin complex
GO:0005875 IDA microtubule associated complex
GO:0007017 IDA microtubule-based process
GO:0007067 IEA mitotic nuclear division
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000259632 DCTN3-008 protein_coding Homo_sapiens 0 726
ENST00000341694 DCTN3-009 protein_coding Homo_sapiens 0 527
ENST00000378911 DCTN3-007 protein_coding Homo_sapiens 0 351
ENST00000378913 DCTN3-010 protein_coding Homo_sapiens 0 527
ENST00000378916 DCTN3-201 protein_coding Homo_sapiens 0 355
ENST00000421919 DCTN3-003 protein_coding Homo_sapiens 0 335
ENST00000472074 DCTN3-006 processed_transcript Homo_sapiens 0 241
ENST00000472418 DCTN3-001 processed_transcript Homo_sapiens 0 292
ENST00000477738 DCTN3-004 protein_coding Homo_sapiens 0 525
ENST00000479399 DCTN3-002 processed_transcript Homo_sapiens 0 207

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