C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005J5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000141349-ENSG00000108840 CGP 9606 17:44070735-44123702
GeneTranscriptPositionBiotype
ENSG00000108840 (HDAC5)
histone deacetylase 5 		ENST00000225983 (HDAC5-003) 44076746-44123638 protein_coding
ENST00000336057 (HDAC5-001) 44076754-44123618 protein_coding
ENST00000586339 (HDAC5-013) 44078608-44079336 retained_intron
ENST00000586802 (HDAC5-002) 44078294-44123275 protein_coding
ENST00000587135 (HDAC5-008) 44093781-44123628 protein_coding
ENST00000587776 (HDAC5-011) 44091293-44093505 retained_intron
ENST00000588261 (HDAC5-010) 44088448-44093187 protein_coding
ENST00000588419 (HDAC5-012) 44082584-44086755 retained_intron
ENST00000588703 (HDAC5-007) 44093664-44123702 protein_coding
ENST00000591714 (HDAC5-009) 44093781-44111341 protein_coding
ENST00000592385 (HDAC5-004) 44081571-44092183 retained_intron
ENST00000593013 (HDAC5-005) 44081597-44085355 retained_intron
ENSG00000141349 (G6PC3)
glucose 6 phosphatase, catalytic, 3 		ENST00000269097 (G6PC3-001) 44070735-44076304 protein_coding
ENST00000585361 (G6PC3-003) 44070751-44076300 nonsense_mediated_decay
ENST00000585962 (G6PC3-005) 44070913-44073939 retained_intron
ENST00000588558 (G6PC3-002) 44070750-44076310 nonsense_mediated_decay
ENST00000590253 (G6PC3-004) 44074734-44076344 protein_coding
ENST00000590639 (G6PC3-008) 44071167-44075832 retained_intron
ENST00000591696 (G6PC3-007) 44070892-44075841 protein_coding
ENST00000593115 (G6PC3-006) 44070745-44074187 nonsense_mediated_decay
ENSG00000267638 (RP11-546M21.6)
 ENST00000585899 (RP11-546M21.6-001) 44115912-44120595 antisense
CIL_0005J5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034793-ENSMUSG00000008855 CGP 10090 11:102189620-102230166
GeneTranscriptPositionBiotype
ENSMUSG00000034793 (G6pc3)
glucose 6 phosphatase, catalytic, 3 		ENSMUST00000070334 (G6pc3-001) 102189620-102194081 protein_coding
ENSMUST00000078975 (G6pc3-002) 102189669-102194081 protein_coding
ENSMUST00000124594 (G6pc3-004) 102191809-102193652 processed_transcript
ENSMUST00000131382 (G6pc3-003) 102189755-102192141 processed_transcript
ENSMUST00000139995 (G6pc3-005) 102189826-102193200 processed_transcript
ENSMUST00000145490 (G6pc3-006) 102192019-102193598 processed_transcript
ENSMUST00000153178 (G6pc3-007) 102192025-102193751 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005J5_0001ENSG00000108840ENST00000225983ENST00000336057ENST00000586339ENST00000586802ENST00000587135ENST00000587776ENST00000588261ENST00000588419ENST00000588703ENST00000591714ENST00000592385ENST00000593013ENSG00000141349ENST00000269097ENST00000585361ENST00000585962ENST00000588558ENST00000590253ENST00000590639ENST00000591696ENST00000593115ENSG00000267638ENST00000585899CIL_0005J5_0002ENSMUSG00000034793ENSMUST00000070334ENSMUST00000078975ENSMUST00000124594ENSMUST00000131382ENSMUST00000139995ENSMUST00000145490ENSMUST00000153178
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005J5_0001ENSG00000108840ENST00000225983ENST00000336057ENST00000586802ENST00000587776ENST00000588261ENST00000588419ENST00000592385ENST00000593013ENSG00000141349ENST00000269097ENST00000585361ENST00000585962ENST00000590253ENST00000591696ENSG00000267638ENST00000585899CIL_0005J5_0002ENSMUSG00000034793ENSMUST00000070334ENSMUST00000078975ENSMUST00000124594ENSMUST00000139995
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108840 ENST00000225983 N/A N/A N/A N/A 2.628±0.00 4.390±0.00 N/A N/A N/A N/A N/A 5.113±0.38 N/A 2.393±0.82
ENST00000336057 N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A N/A N/A N/A N/A
ENST00000586339 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586802 15.242±0.00 8.860±0.00 0.727±0.00 11.006±7.69 9.402±7.85 11.564±10.86 6.691±5.14 7.741±7.04 2.574±1.70 16.082±15.23 28.342±26.70 16.742±8.74 17.225±5.90 11.345±7.21
ENST00000587135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587776 N/A N/A N/A N/A N/A 1.549±0.00 3.058±0.00 N/A N/A N/A 2.546±0.00 N/A N/A N/A
ENST00000588261 N/A N/A 2.692±0.00 N/A N/A N/A N/A 1.206±0.00 N/A 3.722±0.00 N/A 10.661±0.00 N/A N/A
ENST00000588419 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.641±0.00 N/A 52.300±0.00 28.911±0.00 13.734±0.00
ENST00000588703 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592385 N/A 2.522±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593013 N/A N/A 0.756±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000141349 ENST00000269097 25.360±0.00 15.710±0.00 0.457±0.00 8.604±6.88 18.309±0.00 11.631±0.00 3.661±3.55 13.829±13.46 2.394±0.49 11.760±0.00 11.833±0.00 15.276±10.89 28.146±14.15 17.169±5.99
ENST00000585361 N/A 5.427±0.00 N/A 4.831±0.00 7.765±0.00 N/A 2.715±0.00 N/A 0.687±0.00 N/A N/A 6.946±0.00 N/A N/A
ENST00000585962 N/A N/A N/A N/A 0.316±0.00 0.105±0.00 0.071±0.00 N/A 0.264±0.00 N/A N/A N/A N/A N/A
ENST00000588558 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590253 19.979±0.00 24.657±0.00 0.865±0.00 13.945±11.14 10.406±8.41 7.130±0.00 5.501±4.72 13.221±12.15 6.155±0.00 8.367±6.32 10.806±0.00 15.890±9.40 27.209±13.11 14.126±8.93
ENST00000590639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591696 N/A N/A N/A N/A N/A N/A 0.214±0.00 1.239±0.00 N/A 1.417±0.00 N/A 6.061±0.00 6.183±0.00 N/A
ENST00000593115 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267638 ENST00000585899 0.061±0.00 0.134±0.00 N/A 0.308±0.00 0.072±0.00 0.197±0.00 0.182±0.00 N/A 0.227±0.00 N/A N/A 0.142±0.00 N/A 0.121±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000034793 ENSMUST00000070334 23.625±0.56 84.166±4.38 20.251±1.58 15.432±11.68 30.392±8.82 46.388±7.72 18.977±2.89 36.027±2.67 6.488±2.18 23.065±0.72 13.110±4.36 37.318±11.94 11.923±6.57 91.903±42.91
ENSMUST00000078975 20.320±4.23 16.854±2.10 15.587±4.36 5.977±3.32 11.966±4.76 9.022±1.56 10.365±1.37 14.537±3.21 3.713±1.69 8.923±2.05 15.978±3.83 16.208±7.75 3.812±1.92 55.087±27.16
ENSMUST00000124594 N/A 53.766±6.60 N/A N/A N/A 22.135±3.96 N/A N/A 3.063±0.76 9.836±0.00 N/A 39.215±15.64 N/A N/A
ENSMUST00000131382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139995 N/A N/A N/A 8.988±0.00 N/A N/A N/A N/A N/A N/A N/A 10.219±0.00 4.171±1.50 N/A
ENSMUST00000145490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153178 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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