C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | histone deacetylase 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000586339  |
HDAC5-013 |
ENSG00000108840 |
9606 | - |
17:44078608-44079336  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0009B6 | CIL_0009B6_0001 | VISTA | 17:43966083-44567774 |
| CIL_0005J5 | CIL_0005J5_0001 | CGP | 17:44070735-44123702 |
| CIL_0005J4 | CIL_0005J4_0001 | CGP | 17:44076746-44162476 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000149087
|
Hdac5-020 | retained_intron | Mus_musculus | 0 | 366 |
|
ENSMUST00000136304
|
Hdac5-015 | retained_intron | Mus_musculus | 0 | 359 |
|
ENSMUST00000137787
|
Hdac5-014 | retained_intron | Mus_musculus | 0 | 335 |
|
ENSMUST00000107152
|
Hdac5-001 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000107150
|
Hdac5-019 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000124077
|
Hdac5-007 | nonsense_mediated_decay | Mus_musculus | 0 | 335 |
|
ENSMUST00000150965
|
Hdac5-021 | retained_intron | Mus_musculus | 0 | 335 |
|
ENSMUST00000008999
|
Hdac5-002 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000107151
|
Hdac5-003 | protein_coding | Mus_musculus | 0 | 335 |
|
ENSMUST00000145540
|
Hdac5-017 | retained_intron | Mus_musculus | 8.00001e-41 | 171 |
