C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005LQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000004869-ENSDARG00000058114 CGP 7955 2:11299996-11440036
GeneTranscriptPositionBiotype
ENSDARG00000004869 (penka)
proenkephalin a 		ENSDART00000142013 (penka-001) 11299996-11304124 protein_coding
ENSDARG00000058114 (impad1)
inositol monophosphatase domain containing 1 		ENSDART00000080925 (impad1-001) 11424558-11440036 protein_coding
ENSDARG00000097447 (si:dkey-72l21.8)
si:dkey-72l21.8 		ENSDART00000156938 (si:dkey-72l21.8-001) 11439468-11440143 antisense
CIL_0005LQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000181195-ENSG00000104331 CGP 9606 8:56436674-56993844
GeneTranscriptPositionBiotype
ENSG00000104331 (IMPAD1)
inositol monophosphatase domain containing 1 		ENST00000262644 (IMPAD1-001) 56957933-56993844 protein_coding
ENST00000517461 (IMPAD1-002) 56964133-56993360 protein_coding
ENST00000520392 (IMPAD1-003) 56963926-56980112 nonsense_mediated_decay
ENSG00000181195 (PENK)
proenkephalin 		ENST00000314922 (PENK-002) 56440954-56446030 protein_coding
ENST00000451791 (PENK-001) 56441272-56446734 protein_coding
ENST00000517415 (PENK-007) 56436674-56445944 protein_coding
ENST00000518770 (PENK-003) 56445245-56446663 protein_coding
ENST00000518974 (PENK-010) 56441759-56446572 protein_coding
ENST00000520589 (PENK-008) 56436715-56438510 processed_transcript
ENST00000521153 (PENK-004) 56446006-56446671 retained_intron
ENST00000523051 (PENK-005) 56443518-56446641 protein_coding
ENST00000523274 (PENK-006) 56441392-56445648 processed_transcript
ENSG00000241431 (RPL37P6)
ribosomal protein L37 pseudogene 6 		ENST00000460682 (RPL37P6-001) 56588407-56588700 transcribed_processed_pseudogene
ENST00000464216 (RPL37P6-002) 56588385-56588787 processed_transcript
ENSG00000246430 (LINC00968)
long intergenic non-protein coding RNA 968 		ENST00000499425 (LINC00968-001) 56518321-56559671 lincRNA
ENST00000518943 (LINC00968-004) 56520387-56559793 lincRNA
ENST00000519144 (LINC00968-002) 56496246-56559586 lincRNA
ENST00000521483 (LINC00968-006) 56520159-56559497 lincRNA
ENST00000523664 (LINC00968-003) 56520315-56559684 lincRNA
ENST00000523786 (LINC00968-007) 56520119-56559497 lincRNA
ENST00000524338 (LINC00968-005) 56520378-56559823 lincRNA
ENSG00000253139 (RP11-17A4.3)
 ENST00000523166 (RP11-17A4.3-001) 56537057-56540434 lincRNA
ENST00000523724 (RP11-17A4.3-002) 56536758-56540497 lincRNA
ENSG00000253541 (SEPT10P1)
septin 10 pseudogene 1 		ENST00000517342 (SEPT10P1-001) 56476826-56477987 processed_pseudogene
ENSG00000254055 (RP11-17A4.4)
 ENST00000521215 (RP11-17A4.4-001) 56639901-56656465 lincRNA
ENSG00000254254 (RP11-17A4.2)
 ENST00000518662 (RP11-17A4.2-001) 56445807-56552067 antisense
ENST00000522511 (RP11-17A4.2-002) 56489098-56527136 antisense
CIL_0005LQ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045573-ENSMUSG00000066324 CGP 10090 4:4133531-4793355
GeneTranscriptPositionBiotype
ENSMUSG00000045573 (Penk)
preproenkephalin 		ENSMUST00000070375 (Penk-001) 4133531-4138477 protein_coding
ENSMUST00000133567 (Penk-002) 4134112-4138819 protein_coding
ENSMUSG00000066324 (Impad1)
inositol monophosphatase domain containing 1 		ENSMUST00000084949 (Impad1-001) 4762484-4793355 protein_coding
ENSMUSG00000085155 (Gm11780)
predicted gene 11780 		ENSMUST00000136880 (Gm11780-001) 4528204-4528719 processed_pseudogene
ENSMUSG00000085996 (A830012C17Rik)
RIKEN cDNA A830012C17 gene 		ENSMUST00000131498 (A830012C17Rik-001) 4138321-4188703 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LQ_0001ENSDARG00000004869ENSDART00000142013ENSDARG00000058114ENSDART00000080925ENSDARG00000097447ENSDART00000156938CIL_0005LQ_0002ENSG00000104331ENST00000262644ENST00000517461ENST00000520392ENSG00000181195ENST00000314922ENST00000451791ENST00000517415ENST00000518770ENST00000518974ENST00000520589ENST00000521153ENST00000523051ENST00000523274ENSG00000241431ENST00000460682ENST00000464216ENSG00000246430ENST00000499425ENST00000518943ENST00000519144ENST00000521483ENST00000523664ENST00000523786ENST00000524338ENSG00000253139ENST00000523166ENST00000523724ENSG00000253541ENST00000517342ENSG00000254055ENST00000521215ENSG00000254254ENST00000518662ENST00000522511CIL_0005LQ_0003ENSMUSG00000045573ENSMUST00000070375ENSMUST00000133567ENSMUSG00000066324ENSMUST00000084949ENSMUSG00000085155ENSMUST00000136880ENSMUSG00000085996ENSMUST00000131498
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005LQ_0001ENSDARG00000004869ENSDART00000142013ENSDARG00000058114ENSDART00000080925ENSDARG00000097447ENSDART00000156938CIL_0005LQ_0002ENSG00000104331ENST00000262644ENSG00000181195ENST00000314922ENST00000451791ENST00000523274ENSG00000241431ENST00000460682ENST00000464216ENSG00000246430ENST00000499425ENST00000518943ENST00000519144ENST00000521483ENSG00000253139ENST00000523166ENST00000523724ENSG00000253541ENST00000517342ENSG00000254055ENST00000521215ENSG00000254254ENST00000518662CIL_0005LQ_0003ENSMUSG00000045573ENSMUST00000070375ENSMUST00000133567ENSMUSG00000066324ENSMUST00000084949ENSMUSG00000085155ENSMUST00000136880ENSMUSG00000085996ENSMUST00000131498
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000004869 ENSDART00000142013 N/A N/A N/A 53.072±10.15 N/A N/A 0.099±0.06 0.673±0.17 0.034±0.00 N/A 1.902±0.00 N/A N/A N/A
ENSDARG00000058114 ENSDART00000080925 N/A N/A N/A 7.874±2.58 N/A N/A 4.573±0.71 5.813±0.00 1.335±0.00 N/A 3.299±0.00 N/A N/A N/A
ENSDARG00000097447 ENSDART00000156938 N/A N/A N/A N/A N/A N/A 5.303±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104331 ENST00000262644 11.797±0.00 8.828±0.00 4.527±0.00 13.924±1.80 17.622±10.32 5.777±0.81 8.928±3.02 9.276±1.87 10.120±1.16 7.343±0.44 9.224±7.54 5.568±1.92 8.038±0.85 8.767±2.63
ENST00000517461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000181195 ENST00000314922 N/A N/A N/A 2.491±0.46 4.830±0.00 11.249±0.00 0.076±0.00 N/A 0.508±0.00 4.958±0.00 N/A 3.461±2.44 2.009±1.11 33.386±14.68
ENST00000451791 N/A N/A N/A 2.506±0.00 N/A 9.609±0.00 N/A N/A N/A N/A N/A 3.886±0.00 4.274±0.00 51.764±20.42
ENST00000517415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518770 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521153 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523274 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.270±1.99 N/A N/A
ENSG00000241431 ENST00000460682 N/A 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.955±0.00
ENST00000464216 0.067±0.00 N/A N/A 0.035±0.00 0.410±0.00 0.066±0.00 0.032±0.00 0.070±0.00 0.091±0.00 0.073±0.00 1.262±0.00 0.171±0.00 N/A N/A
ENSG00000246430 ENST00000499425 0.186±0.00 N/A N/A N/A 3.278±0.00 0.081±0.00 0.030±0.00 N/A 0.106±0.00 1.073±0.00 N/A N/A 0.595±0.07 N/A
ENST00000518943 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.894±0.00 N/A N/A N/A
ENST00000519144 0.910±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521483 N/A N/A N/A N/A 0.586±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523664 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253139 ENST00000523166 N/A N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.799±0.00
ENST00000523724 N/A N/A N/A N/A 0.050±0.00 N/A N/A N/A N/A 0.646±0.00 N/A 0.056±0.00 N/A 0.488±0.07
ENSG00000253541 ENST00000517342 0.039±0.00 N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A 0.082±0.00 0.018±0.00 N/A 0.025±0.00 3.551±1.90
ENSG00000254055 ENST00000521215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00
ENSG00000254254 ENST00000518662 1.081±0.00 2.948±0.00 0.132±0.00 1.358±1.14 1.181±0.97 0.034±0.00 0.885±0.85 0.635±0.45 0.389±0.14 1.089±0.00 0.184±0.00 0.201±0.09 N/A N/A
ENST00000522511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000045573 ENSMUST00000070375 2.683±1.36 N/A 4.835±0.00 0.601±0.00 6.355±4.41 1.143±0.35 0.643±0.12 0.515±0.04 0.231±0.11 0.511±0.07 2.508±0.56 37.877±20.58 2.652±4.51 50.938±15.68
ENSMUST00000133567 16.086±0.70 27.294±10.70 8.112±0.03 11.392±5.34 31.774±13.89 10.617±2.18 2.139±1.10 2.129±0.46 0.303±0.21 3.793±0.54 0.951±0.12 67.736±18.80 5.912±9.87 38.603±23.44
ENSMUSG00000066324 ENSMUST00000084949 10.252±2.75 7.453±1.21 10.982±0.33 11.827±3.33 8.137±2.90 9.508±2.12 5.876±0.35 9.722±1.38 5.644±0.78 8.607±1.32 13.890±0.90 13.861±4.77 8.946±2.76 7.925±2.62
ENSMUSG00000085155 ENSMUST00000136880 N/A N/A N/A 0.086±0.00 0.341±0.17 N/A 0.086±0.00 0.090±0.00 N/A N/A N/A 0.088±0.00 N/A 170.720±120.05
ENSMUSG00000085996 ENSMUST00000131498 N/A N/A N/A N/A N/A N/A N/A N/A 0.018±0.00 N/A N/A N/A N/A N/A

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