C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11780
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136880 Gm11780-001 ENSMUSG00000085155 10090 - 4:4528204-4528719 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartKidneyOvaryTestisENSMUST00000136880
Transcript ID Brain Breast Heart Kidney Ovary Testis
ENSMUST00000136880 0.086±0.00 0.341±0.17 0.086±0.00 0.090±0.00 0.088±0.00 170.720±120.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LQ CIL_0005LQ_0003 CGP 4:4133531-4793355

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000344035 PTP4A2-201 protein_coding Homo_sapiens 0 399
ENST00000457805 PTP4A2-020 protein_coding Homo_sapiens 0 243
ENST00000468531 PTP4A2-007 protein_coding Homo_sapiens 2e-38 163
ENST00000470404 PTP4A2-006 protein_coding Homo_sapiens 4e-39 165
ENST00000484483 PTP4A2-005 retained_intron Homo_sapiens 5e-39 165
ENST00000489313 PTP4A2-002 retained_intron Homo_sapiens 6e-37 159
ENST00000528253 PTP4A2-015 nonsense_mediated_decay Homo_sapiens 6e-39 165
ENST00000532001 PTP4A2-016 nonsense_mediated_decay Homo_sapiens 0 243
ENST00000534796 PTP4A2-008 protein_coding Homo_sapiens 0.00000000004 73
ENST00000590314 PTP4A2P1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000602683 PTP4A2-021 protein_coding Homo_sapiens 0 244
ENST00000602725 PTP4A2-019 protein_coding Homo_sapiens 0 399

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