C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005SA_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000126562-ENSG00000183978 CGP 9606 17:42780678-42798704
GeneTranscriptPositionBiotype
ENSG00000126562 (WNK4)
WNK lysine deficient protein kinase 4 		ENST00000246914 (WNK4-001) 42780678-42796936 protein_coding
ENST00000587705 (WNK4-006) 42785327-42788395 processed_transcript
ENST00000587745 (WNK4-007) 42793715-42795742 protein_coding
ENST00000591448 (WNK4-002) 42780681-42796936 nonsense_mediated_decay
ENST00000592072 (WNK4-004) 42785327-42794489 retained_intron
ENST00000592669 (WNK4-005) 42783609-42784453 retained_intron
ENSG00000183978 (COA3)
cytochrome c oxidase assembly factor 3 		ENST00000328434 (COA3-001) 42797634-42798704 protein_coding
ENST00000586680 (COA3-002) 42795147-42798690 nonsense_mediated_decay
CIL_0005SA_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035112-ENSMUSG00000017188 CGP 10090 11:101260567-101279114
GeneTranscriptPositionBiotype
ENSMUSG00000017188 (Coa3)
cytochrome C oxidase assembly factor 3 		ENSMUST00000017332 (Coa3-001) 101277968-101279114 protein_coding
ENSMUST00000168089 (Coa3-002) 101278338-101278943 protein_coding
ENSMUSG00000035112 (Wnk4)
WNK lysine deficient protein kinase 4 		ENSMUST00000103108 (Wnk4-001) 101260598-101277409 protein_coding
ENSMUST00000139487 (Wnk4-002) 101260567-101277409 nonsense_mediated_decay
ENSMUST00000147741 (Wnk4-004) 101260655-101277274 nonsense_mediated_decay
ENSMUST00000170056 (Wnk4-003) 101265308-101274129 nonsense_mediated_decay
ENSMUST00000170372 (Wnk4-005) 101276646-101277406 protein_coding
ENSMUSG00000078653 (Cntd1)
cyclin N-terminal domain containing 1 		ENSMUST00000103107 (Cntd1-001) 101279096-101288701 protein_coding
ENSMUST00000128735 (Cntd1-002) 101279012-101286545 processed_transcript
ENSMUST00000153438 (Cntd1-003) 101286055-101296317 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SA_0001ENSG00000126562ENST00000246914ENST00000587705ENST00000587745ENST00000591448ENST00000592072ENST00000592669ENSG00000183978ENST00000328434ENST00000586680CIL_0005SA_0002ENSMUSG00000017188ENSMUST00000017332ENSMUST00000168089ENSMUSG00000035112ENSMUST00000103108ENSMUST00000139487ENSMUST00000147741ENSMUST00000170056ENSMUST00000170372ENSMUSG00000078653ENSMUST00000103107ENSMUST00000128735ENSMUST00000153438
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005SA_0001ENSG00000126562ENST00000246914ENST00000591448ENST00000592072ENSG00000183978ENST00000328434ENST00000586680CIL_0005SA_0002ENSMUSG00000017188ENSMUST00000017332ENSMUST00000168089ENSMUSG00000035112ENSMUST00000103108ENSMUST00000139487ENSMUST00000147741ENSMUST00000170372ENSMUSG00000078653ENSMUST00000103107
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000126562 ENST00000246914 N/A N/A N/A N/A 0.782±0.00 N/A N/A 9.447±0.00 N/A N/A N/A 12.220±0.82 N/A N/A
ENST00000587705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587745 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591448 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.324±0.00
ENST00000592072 N/A N/A 1.972±0.00 N/A 1.359±0.00 N/A N/A N/A 0.423±0.00 N/A N/A 1.367±0.00 N/A N/A
ENST00000592669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183978 ENST00000328434 28.682±0.00 37.213±0.00 6.514±0.00 33.372±17.64 22.099±19.62 30.306±18.07 14.581±10.84 68.135±57.70 35.584±33.12 15.331±12.06 20.421±7.90 67.473±36.86 41.799±15.39 26.102±16.19
ENST00000586680 N/A N/A N/A N/A N/A 1.659±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000017188 ENSMUST00000017332 81.654±8.93 57.505±5.20 78.218±3.75 68.576±12.35 65.511±12.67 112.811±16.98 60.247±1.95 116.737±18.25 64.520±19.96 63.512±6.31 54.789±4.50 73.411±12.70 45.450±9.47 47.057±6.44
ENSMUST00000168089 N/A 148.161±30.38 N/A N/A 139.093±11.08 351.899±80.45 108.914±2.83 258.259±67.85 104.135±12.33 190.628±39.17 N/A 168.285±24.59 N/A N/A
ENSMUSG00000035112 ENSMUST00000103108 2.070±1.43 0.108±0.05 2.325±0.92 1.153±0.05 0.182±0.04 6.083±1.46 2.022±1.16 19.870±8.60 1.823±1.29 1.803±0.39 0.068±0.00 2.158±0.84 3.489±2.09 1.061±0.40
ENSMUST00000139487 N/A 0.066±0.00 N/A N/A N/A 1.438±0.08 N/A N/A N/A N/A 0.036±0.01 N/A N/A N/A
ENSMUST00000147741 N/A 0.056±0.00 N/A N/A 0.172±0.06 N/A 0.393±0.11 5.725±0.62 0.193±0.00 N/A 0.069±0.02 2.364±0.44 1.519±0.98 0.419±0.00
ENSMUST00000170056 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.134±0.03 N/A N/A N/A
ENSMUSG00000078653 ENSMUST00000103107 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.528±0.00
ENSMUST00000128735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153438 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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