C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: establishment of sister chromatid cohesion N-acetyltransferase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000305188 ESCO2-001 ENSG00000171320 9606 + 8:27774386-27805316 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartLungOvaryPlacentaTestisENST00000305188
Transcript ID Adrenal Colon Heart Lung Ovary Placenta Testis
ENST00000305188 0.023±0.00 0.285±0.00 0.053±0.00 0.043±0.00 0.405±0.28 0.148±0.00 2.102±0.70

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009DK CIL_0009DK_0001 VISTA 8:27594923-28195834
CIL_0005SU CIL_0005SU_0002 CGP 8:27733311-27812640
CIL_00073A CIL_00073A_0002 CGP 8:27771949-27838095

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0000785 IDA chromatin
GO:0001741 IEA XY body
GO:0002244 IEA hematopoietic progenitor cell differentiation
GO:0004468 IEA lysine N-acetyltransferase activity, acting on acetyl phosphate as donor
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0005794 IDA Golgi apparatus
GO:0006275 IMP regulation of DNA replication
GO:0006302 IEA double-strand break repair
GO:0007059 IEA chromosome segregation
GO:0010369 IEA chromocenter
GO:0031618 IEA nuclear pericentric heterochromatin
GO:0034421 IMP post-translational protein acetylation
GO:0035861 IEA site of double-strand break
GO:0046872 IEA metal ion binding
GO:0071168 IEA protein localization to chromatin

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022613 Esco2-001 protein_coding Mus_musculus 0 898

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