C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 3, subunit A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000541549 EIF3A-201 ENSG00000107581 9606 - 10:119035793-119080823 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000541549
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000541549 19.376±0.00 8.747±6.33 11.611±2.98 12.825±3.41 12.474±9.11 9.784±4.75 10.768±0.00 7.684±1.56 52.091±0.00 19.580±6.64 21.367±20.77 20.351±8.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00062M CIL_00062M_0001 CGP 10:118674167-119033732
CIL_0003K9 CIL_0003K9_0001 CGP 10:119029716-119080823
CIL_0005Y7 CIL_0005Y7_0001 CGP 10:119033670-119137984

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001731 IEA formation of translation preinitiation complex
GO:0001732 IDA formation of cytoplasmic translation initiation complex
GO:0003743 IC translation initiation factor activity
GO:0005198 NAS structural molecule activity
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 TAS cytosol
GO:0005852 IDA eukaryotic translation initiation factor 3 complex
GO:0006412 TAS translation
GO:0006413 IC translational initiation
GO:0006446 IEA regulation of translational initiation
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016282 IEA eukaryotic 43S preinitiation complex
GO:0033290 IEA eukaryotic 48S preinitiation complex
GO:0044267 TAS cellular protein metabolic process
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025955 Eif3a-201 protein_coding Mus_musculus 0 4157

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