C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005Y9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000060457-ENSDARG00000045038 CGP 7955 12:38813180-38881702
GeneTranscriptPositionBiotype
ENSDARG00000045038 (tekt3)
tektin 3 		ENSDART00000066213 (tekt3-201) 38865946-38880343 protein_coding
ENSDART00000153281 (tekt3-001) 38865711-38881702 protein_coding
ENSDARG00000060457 (pmp22b)
peripheral myelin protein 22b 		ENSDART00000085201 (pmp22b-001) 38813180-38837515 protein_coding
ENSDART00000146142 (pmp22b-002) 38815539-38837490 protein_coding
CIL_0005Y9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109099-ENSG00000125409 CGP 9606 17:15229777-15341641
GeneTranscriptPositionBiotype
ENSG00000109099 (PMP22)
peripheral myelin protein 22 		ENST00000312280 (PMP22-002) 15229778-15265307 protein_coding
ENST00000395936 (PMP22-003) 15230797-15262541 protein_coding
ENST00000395938 (PMP22-001) 15229778-15262589 protein_coding
ENST00000426385 (PMP22-008) 15239341-15262516 protein_coding
ENST00000471150 (PMP22-005) 15260280-15265308 retained_intron
ENST00000494511 (PMP22-004) 15230516-15265319 protein_coding
ENST00000580497 (PMP22-007) 15258737-15260768 retained_intron
ENST00000580584 (PMP22-006) 15231067-15265326 protein_coding
ENST00000612492 (PMP22-201) 15229777-15262589 protein_coding
ENSG00000125409 (TEKT3)
tektin 3 		ENST00000338696 (TEKT3-201) 15303814-15331620 protein_coding
ENST00000395930 (TEKT3-001) 15303811-15341641 protein_coding
ENST00000395931 (TEKT3-007) 15303816-15341597 nonsense_mediated_decay
ENST00000462175 (TEKT3-004) 15303811-15307001 processed_transcript
ENST00000470325 (TEKT3-003) 15327770-15331614 retained_intron
ENST00000536146 (TEKT3-006) 15331143-15338556 protein_coding
ENST00000539245 (TEKT3-005) 15312282-15341597 protein_coding
ENST00000539316 (TEKT3-002) 15331166-15341632 protein_coding
ENST00000543896 (TEKT3-009) 15331340-15341593 protein_coding
ENST00000578011 (TEKT3-011) 15303811-15308863 retained_intron
ENSG00000230971 (AC005703.3)
 ENST00000431343 (AC005703.3-001) 15267461-15272290 lincRNA
ENSG00000237377 (AC005703.2)
 ENST00000453339 (AC005703.2-001) 15276562-15279477 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y9_0001ENSDARG00000045038ENSDART00000066213ENSDART00000153281ENSDARG00000060457ENSDART00000085201ENSDART00000146142CIL_0005Y9_0002ENSG00000109099ENST00000312280ENST00000395936ENST00000395938ENST00000426385ENST00000471150ENST00000494511ENST00000580497ENST00000580584ENST00000612492ENSG00000125409ENST00000338696ENST00000395930ENST00000395931ENST00000462175ENST00000470325ENST00000536146ENST00000539245ENST00000539316ENST00000543896ENST00000578011ENSG00000230971ENST00000431343ENSG00000237377ENST00000453339
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005Y9_0001ENSDARG00000045038ENSDART00000066213ENSDART00000153281ENSDARG00000060457ENSDART00000085201ENSDART00000146142CIL_0005Y9_0002ENSG00000109099ENST00000312280ENST00000395936ENST00000395938ENST00000494511ENST00000612492ENSG00000125409ENST00000338696ENST00000395930ENST00000462175ENST00000470325ENST00000536146ENST00000539245ENST00000539316ENST00000543896ENST00000578011ENSG00000230971ENST00000431343ENSG00000237377ENST00000453339
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045038 ENSDART00000066213 N/A N/A N/A 0.274±0.00 N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000153281 N/A N/A N/A 0.082±0.00 N/A N/A 0.175±0.01 0.352±0.00 N/A N/A 0.097±0.00 N/A N/A N/A
ENSDARG00000060457 ENSDART00000085201 N/A N/A N/A 2.800±0.15 N/A N/A 60.557±29.77 23.697±8.53 0.660±0.00 N/A 36.995±0.00 N/A N/A N/A
ENSDART00000146142 N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109099 ENST00000312280 N/A N/A N/A 11.639±0.00 25.594±0.00 2.142±0.00 13.306±10.78 N/A 4.535±0.00 13.518±9.96 N/A 12.127±0.00 N/A 1.395±0.00
ENST00000395936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.228±0.00 31.460±0.00 4.079±0.00
ENST00000395938 110.855±0.00 52.693±0.00 N/A 49.102±30.91 30.812±16.32 104.830±0.00 20.199±16.62 13.847±12.76 9.155±4.34 49.516±44.00 67.701±31.62 29.517±23.61 72.047±24.81 26.424±20.27
ENST00000426385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471150 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494511 N/A N/A 1.401±0.00 27.934±0.00 10.054±0.00 N/A N/A N/A 10.242±0.00 6.640±0.00 N/A N/A N/A N/A
ENST00000580497 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000612492 N/A N/A N/A N/A N/A 7.539±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000125409 ENST00000338696 N/A 0.114±0.00 N/A N/A N/A 0.130±0.00 N/A N/A N/A 0.251±0.00 N/A 0.218±0.05 0.158±0.00 11.260±2.87
ENST00000395930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.568±0.00 N/A 6.513±0.75
ENST00000395931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462175 N/A 0.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.259±0.01 N/A
ENST00000470325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.044±0.00 N/A
ENST00000536146 0.146±0.00 N/A N/A N/A 0.025±0.00 N/A N/A N/A 0.063±0.00 N/A N/A N/A N/A N/A
ENST00000539245 N/A N/A N/A 0.064±0.00 N/A 0.038±0.00 N/A N/A 0.027±0.00 N/A N/A 0.192±0.00 0.109±0.00 N/A
ENST00000539316 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.276±0.00 N/A N/A N/A N/A
ENST00000543896 0.701±0.00 0.218±0.00 N/A N/A 0.208±0.00 0.134±0.00 0.258±0.00 0.456±0.00 N/A N/A 0.034±0.00 N/A 0.108±0.00 N/A
ENST00000578011 N/A N/A N/A 0.632±0.00 N/A N/A N/A 0.276±0.00 N/A 1.936±0.00 N/A 1.843±1.04 0.279±0.05 N/A
ENSG00000230971 ENST00000431343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.016±0.00 N/A 0.496±0.26
ENSG00000237377 ENST00000453339 N/A N/A N/A N/A N/A N/A 0.401±0.00 N/A N/A N/A N/A N/A 0.169±0.00 0.094±0.00

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