C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peripheral myelin protein 22b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000085201 pmp22b-001 ENSDARG00000060457 7955 - 12:38813180-38837515 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000085201
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000085201 2.800±0.15 60.557±29.77 23.697±8.53 0.660±0.00 36.995±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005Y3 CIL_0005Y3_0001 CGP 12:38509796-38837515
CIL_0005Y9 CIL_0005Y9_0001 CGP 12:38813180-38881702

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0016021 IEA integral to membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018361 Pmp22-001 protein_coding Mus_musculus 3e-20 104
ENSMUST00000108702 Pmp22-002 protein_coding Mus_musculus 3e-20 104
ENST00000312280 PMP22-002 protein_coding Homo_sapiens 4e-29 134
ENST00000395936 PMP22-003 protein_coding Homo_sapiens 4e-16 90
ENST00000395938 PMP22-001 protein_coding Homo_sapiens 4e-29 134
ENST00000494511 PMP22-004 protein_coding Homo_sapiens 2e-29 134
ENST00000612492 PMP22-201 protein_coding Homo_sapiens 4e-29 134

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