C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000617_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000142178-ENSG00000160207 CGP 9606 21:43414515-43659493
GeneTranscriptPositionBiotype
ENSG00000142178 (SIK1)
salt-inducible kinase 1 		ENST00000270162 (SIK1-001) 43414515-43427128 protein_coding
ENST00000478426 (SIK1-002) 43421112-43422005 retained_intron
ENSG00000160207 (HSF2BP)
heat shock transcription factor 2 binding protein 		ENST00000291560 (HSF2BP-001) 43529192-43659493 protein_coding
ENST00000443485 (HSF2BP-002) 43613851-43659470 protein_coding
ENSG00000214326 (RPL31P1)
ribosomal protein L31 pseudogene 1 		ENST00000398116 (RPL31P1-001) 43551229-43551600 processed_pseudogene
ENSG00000223975 (AP001048.4)
 ENST00000436359 (AP001048.4-001) 43465309-43467298 lincRNA
ENSG00000234289 (H2BFS)
H2B histone family, member S (pseudogene) 		ENST00000599962 (H2BFS-001) 43565189-43565648 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_000617_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024042-ENSMUSG00000002076 CGP 10090 17:31844248-32034508
GeneTranscriptPositionBiotype
ENSMUSG00000002076 (Hsf2bp)
heat shock transcription factor 2 binding protein 		ENSMUST00000002145 (Hsf2bp-001) 31944769-32034508 protein_coding
ENSMUST00000133308 (Hsf2bp-003) 31946328-32013403 protein_coding
ENSMUST00000138172 (Hsf2bp-002) 32011282-32023205 processed_transcript
ENSMUSG00000024042 (Sik1)
salt inducible kinase 1 		ENSMUST00000024839 (Sik1-201) 31844248-31855792 protein_coding
ENSMUSG00000091548 (Gm17572)
predicted gene, 17572 		ENSMUST00000171455 (Gm17572-201) 31950549-31950968 processed_pseudogene

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000617_0001ENSG00000142178ENST00000270162ENST00000478426ENSG00000160207ENST00000291560ENST00000443485ENSG00000214326ENST00000398116ENSG00000223975ENST00000436359ENSG00000234289ENST00000599962CIL_000617_0002ENSMUSG00000002076ENSMUST00000002145ENSMUST00000133308ENSMUST00000138172ENSMUSG00000024042ENSMUST00000024839ENSMUSG00000091548ENSMUST00000171455
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000617_0001ENSG00000142178ENST00000270162ENST00000478426ENSG00000160207ENST00000291560ENST00000443485ENSG00000214326ENST00000398116ENSG00000223975ENST00000436359ENSG00000234289ENST00000599962CIL_000617_0002ENSMUSG00000002076ENSMUST00000002145ENSMUST00000133308ENSMUST00000138172ENSMUSG00000024042ENSMUST00000024839ENSMUSG00000091548ENSMUST00000171455
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000142178 ENST00000270162 3.984±0.00 0.480±0.00 0.199±0.00 0.119±0.00 0.069±0.00 0.037±0.03 0.225±0.14 0.073±0.00 0.115±0.02 0.599±0.52 0.064±0.00 1.553±1.71 0.518±0.60 0.347±0.00
ENST00000478426 N/A N/A N/A 0.157±0.00 0.317±0.07 0.043±0.00 N/A 0.095±0.00 0.162±0.00 N/A N/A 0.637±0.28 0.105±0.00 N/A
ENSG00000160207 ENST00000291560 0.064±0.00 0.059±0.00 N/A 0.241±0.15 0.175±0.00 N/A 0.039±0.00 0.084±0.03 0.069±0.03 N/A N/A 0.377±0.16 0.634±0.00 16.924±2.10
ENST00000443485 0.073±0.00 0.420±0.00 0.039±0.00 0.446±0.03 N/A 0.197±0.00 0.057±0.00 N/A N/A N/A 0.123±0.00 0.578±0.34 N/A 42.023±0.00
ENSG00000214326 ENST00000398116 0.194±0.00 N/A N/A N/A 0.040±0.00 0.187±0.00 N/A N/A 0.107±0.00 0.112±0.00 N/A N/A N/A N/A
ENSG00000223975 ENST00000436359 2.090±0.00 N/A N/A N/A N/A N/A N/A 0.471±0.00 0.660±0.00 N/A N/A 0.236±0.00 0.558±0.00 3.078±0.85
ENSG00000234289 ENST00000599962 2.374±0.00 7.456±0.00 0.860±0.00 N/A 1.825±0.00 10.851±4.77 1.074±0.00 1.478±0.00 2.820±0.00 7.252±0.26 0.718±0.22 11.910±11.70 13.419±0.00 2.641±0.82
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002076 ENSMUST00000002145 0.051±0.00 N/A N/A 0.091±0.03 0.022±0.00 0.147±0.04 0.081±0.03 0.547±0.08 0.047±0.02 0.096±0.07 0.034±0.01 0.121±0.08 0.397±0.29 8.852±5.70
ENSMUST00000133308 0.052±0.00 0.077±0.00 0.327±0.00 0.066±0.02 0.076±0.03 0.742±0.27 0.191±0.09 1.506±0.81 0.141±0.07 0.159±0.09 0.063±0.03 0.408±0.35 1.235±0.01 6.638±1.31
ENSMUST00000138172 N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A 0.530±0.00 0.842±0.50 7.453±0.88 93.335±0.00
ENSMUSG00000024042 ENSMUST00000024839 11.129±4.53 10.059±4.04 11.033±5.63 3.322±1.69 15.494±6.75 6.079±0.28 4.726±2.13 16.611±3.91 3.144±1.11 31.495±8.34 2.247±0.49 12.038±2.92 8.437±1.00 5.103±3.27
ENSMUSG00000091548 ENSMUST00000171455 N/A N/A N/A N/A N/A N/A N/A 0.149±0.05 0.207±0.00 N/A N/A 0.313±0.00 N/A 0.182±0.06

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